Dataset Information

Fishers and groupers (Epinephelus marginatus and E. morio) in the coast of Brazil: integrating information for conservation.

ABSTRACT: BACKGROUND:Groupers are a vulnerable but economically important group of fish, especially for small-scale fisheries. We investigated catches and local ecological knowledge (LEK) of diet, habitat, and past fishing experiences. METHODS:Landings, prices, interviews, and restaurants demand for two species, Epinephelus marginatus (dusky grouper) and Epinephelus morio (red grouper), were registered. RESULTS:We visited 74 markets and 79 sites on the coast of Brazil in 2017-2018, and we interviewed 71 fishers: Bahia (NE), Rio de Janeiro and São Paulo (SE), and Santa Catarina (S). The landings sampled of dusky grouper (2016-2017) in Rio de Janeiro were: n?=?222, size 38-109?cm, weight 1-24?kg, average 3.84?kg; in São Paulo, São Sebastião were: n?=?47, size 39-106?cm, weight 2-8?kg, average of 2.77?kg; and at Santos: n?=?80, 26-120?cm, weight 0.36-15?kg, average 2.72?kg. Red grouper was observed in markets in the northeastern Brazil. We did not observe Epinephelus marginatus from Bahia northward; a maximum size of 200?cm was reported south of the Bahia, besides Rio de Janeiro and São Paulo coasts, 20?years ago (or longer) by 12 fishers. Local knowledge of fishers was important for grouper data of habitat and diet; the reproduction period was identified by fishers as September to March. CONCLUSIONS:Groupers can be considered as a cultural and ecological keystone species. We suggest protective measures: 1) fishing zoning, 2) islands (MPAs) with the surveillance of fishers, 3) late Spring and early Summer as key periods for management (grouper reproduction), 4) studies on grouper larvae, 5) mapping of fishing spots, 6) studies on local knowledge. Collaboration with small-scale fishers and local knowledge could contribute to low-conflict management measures. In that regard, integrative models of management from Latin America, by using local knowledge and citizen science, could produce successful grouper management for Brazilian data-poor fisheries, a contrasting reality to the Mediterranean areas. Finally, the distribution of E. marginatus in Brazil leave us with questions: a) Have dusky groupers disappeared from Bahia because of a decline in the population? b) Was it uncommon in Northeast Brazil? c) Did changes in water temperatures forced a movement southward?

SUBMITTER: Begossi A

PROVIDER: S-EPMC6836445 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature

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Fishers and groupers (Epinephelus marginatus and E. morio) in the coast of Brazil: integrating information for conservation.

Begossi Alpina A Salyvonchyk Svetlana S Glamuzina Branko B de Souza Shirley Pacheco SP Lopes Priscila F M PFM Priolli Regina H G RHG do Prado Djalma Osmanir DO Ramires Milena M Clauzet Mariana M Zapelini Cleverson C Schneider Daiana T DT Silva Luis T LT Silvano Renato A M RAM

Journal of ethnobiology and ethnomedicine 20191106 1

<h4>Background</h4>Groupers are a vulnerable but economically important group of fish, especially for small-scale fisheries. We investigated catches and local ecological knowledge (LEK) of diet, habitat, and past fishing experiences.<h4>Methods</h4>Landings, prices, interviews, and restaurants demand for two species, Epinephelus marginatus (dusky grouper) and Epinephelus morio (red grouper), were registered.<h4>Results</h4>We visited 74 markets and 79 sites on the coast of Brazil in 2017-2018, a ...[more]

PMID: 31694660

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Project description:BackgroundAlthough fishers' knowledge has been recently considered into management programmes, there is still the need to establish a better understanding of fishers' perceptions and cognition. Fishers can provide novel information on the biology and ecology of species, which can potentially be used in the management of fisheries. The knowledge fishers have and how they classify nature is empirically based. It is common, for example, to observe that fishers' taxonomy is often represented by the generic level, one of the hierarchical categories of folk classification that is somewhat analogous to the Linnean genus, as it groups organisms of a higher rank than the folk species.In this study we compiled the knowledge fishers have on local fish, such as their folk names, diet and habitat.MethodsFive coastal communities widely distributed along the Brazilian coast were studied: two from the northeast (Porto Sauípe and Itacimirim, in Bahia State, n of interviewees?=?34), two from the southeast (Itaipu at Niterói and Copacabana at Rio de Janeiro, Rio de Janeiro State, n?=?35) and one from the south coast (Pântano do Sul, in Santa Catarina State, n?=?23). Fish pictures were randomly ordered and the same order was presented to all interviewees (n?=?92), when they were then asked about the species name and classification and its habitat and diet preferences.ResultsFishers make clusters of fish species, usually hierarchically; fishers of the coast of Brazil use mostly primary lexemes (generic names) to name fish; and fishers did not differentiate between scientific species, since the same folk generic name included two different scientific species. Fishers provide information on species to which there is scarce or no information on diet and habitat, such as Rhinobatos percellens (chola guitarfish, arraia viola or cação viola), Sphoeroides dorsalis (marbled puffer, baiacu), Mycteroperca acutirostris (comb grouper, badejo) and Dasyatis guttata (longnose stingray, arraia, arraia manteiga).Conclusionsfishers' knowledge on fish diet and fish habitat can be strategic to management, since their knowledge concentrates on the fishery target species, which are the ones under higher fishing pressure. Besides, fishers showed to have knowledge on species still poorly known to science.

Project description:Due to diminishing fish meal (FM) supplies, superb protein (PRO) sources are needed for aquaculture, such as soy-based PRO. However, these can cause enteritis and even intestinal injury in fish when used at high proportions in feed. This research examines the effects of substituting soybean protein concentrate (SPC) for FM on the growth performance and intestinal balance of pearl gentian groupers and investigates the mechanism of SPC-induced enteritis. Experimental fish (n = 720) were fed 1 of 3 following diets: (1) a 50% FM diet (control), (2) a diet with 20% of the FM substituted with SPC (group SPC20), and (3) a 40% SPC-substituted diet (SPC40). Fish were fed for 10 wk iso-nitrogenous (50% PRO) and iso-lipidic (10% lipid) diets. Groups SPC20 and SPC40 showed significantly lower developmental performance and intestinal structures than control. Group SPC40 had significantly higher expressions of pro-inflammatory-related genes, such as interleukin 1β (IL1β), IL12, IL17 and tumor necrosis factor α and significantly lower expressions of anti-inflammatory-related genes, such as IL5, IL10 and transforming growth factor β1. Biochemical and 16S high-throughput sequencing showed that the abundance and functions of intestinal flora in group SPC40 were significantly affected (P < 0.05), and there were significant correlations between operational taxonomic unit abundance variations and inflammatory gene expressions at genus level (P < 0.05). The second- and third-generation full-length transcriptome sequence was used to analyze the mechanism of SPC-induced enteritis in pearl gentian groupers, which showed that enteritis induced by SPC may be caused by disturbances to intestinal immune function induced by an imbalance in intestinal nutrition and metabolism, such as the intestinal immunity network for IgA production pathway. However, it remains unclear as to which intestinal immune or nutritional imbalance is most important in enteritis development. This study provides a basis for further research into soy PRO-related enteritis in fish.

Project description:Pseudomonas plecoglossicida, a gram-negative bacterium, is the main pathogen of visceral white-point disease in marine fish, responsible for substantial economic losses in the aquaculture industry. The FliL protein, involved in torque production of the bacterial flagella motor, is essential for the pathogenicity of a variety of bacteria. In the current study, the fliL gene deletion strain (ΔfliL), fliL gene complement strain (C-ΔfliL), and wild-type strain (NZBD9) were compared to explore the influence of the fliL gene on P. plecoglossicida pathogenicity and its role in host immune response. Results showed that fliL gene deletion increased the survival rate (50%) and reduced white spot disease progression in the hybrid groupers. Moreover, compared to the NZBD9 strain, the ΔfliL strain was consistently associated with lower bacterial loads in the grouper spleen, head kidney, liver, and intestine, coupled with reduced tissue damage. Transcriptomic analysis identified 2 238 differentially expressed genes (DEGs) in the spleens of fish infected with the ΔfliL strain compared to the NZBD9 strain. Based on Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis, the DEGs were significantly enriched in seven immune system-associated pathways and three signaling molecule and interaction pathways. Upon infection with the ΔfliL strain, the toll-like receptor (TLR) signaling pathway was activated in the hybrid groupers, leading to the activation of transcription factors (NF-κB and AP1) and cytokines. The expression levels of proinflammatory cytokine-related genes IL-1β, IL-12B, and IL-6 and chemokine-related genes CXCL9, CXCL10, and CCL4 were significantly up-regulated. In conclusion, the fliL gene markedly influenced the pathogenicity of P. plecoglossicida infection in the hybrid groupers. Notably, deletion of fliL gene in P. plecoglossicida induced a robust immune response in the groupers, promoting defense against and elimination of pathogens via an inflammatory response involving multiple cytokines.

Project description:Groupers (Epinephelidae) are ecologically, commercially, and culturally important predatory fishes throughout their global distribution range in tropical, subtropical and occasionally temperate regions. They are key species for modern and ancient fisheries in the Mediterranean which have been heavily overfished in the past century leading to smaller catch sizes, lower CPUE, and decreased biomass. There are four species of grouper native to the Mediterranean within the Epinephelus genus.The abundance and distribution of grouper species prior to the 20th century in the Mediterranean remains poorly known. Using peptide mass fingerprinting, also known as Zooarchaeology by Mass Spectrometry (ZooMS), we investigated if ZooMS is a viable method for identifying intra-genus grouper bones to species level. Due to the lack of publicly available genomic sequences and for validation of ZooMS markers, we reconstructed collagen type I amino acid sequences using LC-MS/MS for four Epinephelus spp. Adequate variation between collagen sequences enabled the production of the best supported phylogenetic tree for Mediterranean Epinephelus spp. to date. We identified 23 previously undescribed ZooMS biomarkers capable of distinguishing groupers to the species level. Our novel biomarkers were applied to a case study of 23 grouper/comber fish bones from the Middle to Late Holocene archaeological site of Kinet Höyük, located along the coast of Iskenderun Bay, Turkey. ZooMS markers enabled species level identification of 19 bones with 18 identified as Epinephelus aeneus and 1 identified as Epinephelus marginatus. Combining ZooMS identifications with catch size reconstructions has revealed that E. aeneus is capable of growing ca. 30 cm larger than previously reported. This abundance and dominance of E. aeneus locally at Kinet Höyük is consistent with E. aeneus being the most prevalent grouper species in Iskenderun Bay today, testifying to several millennia of this species local population persistence despite fishing pressure, habitat degradation, and climatic changes.

Dataset Information

Fishers and groupers (Epinephelus marginatus and E. morio) in the coast of Brazil: integrating information for conservation.

Publications

Fishers and groupers (Epinephelus marginatus and E. morio) in the coast of Brazil: integrating information for conservation.

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