Unknown

Dataset Information

0

De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters.


ABSTRACT: Interest in harvesting potential benefits from microalgae renders it necessary to have the many ecological niches of a single species to be investigated. This dataset comprises de novo whole genome assembly of two mangrove-isolated microalgae (from division Chlorophyta); Chlorella vulgaris UMT-M1 and Messastrum gracile SE-MC4 from Universiti Malaysia Terengganu, Malaysia. Library runs were carried out with 2 × 150 base paired-ends reads, whereas sequencing was conducted using Illumina Novaseq 2500 platform. Sequencing yielded raw reads amounting to ?11 Gb in total bases for both species and was further assembled de novo. Genome assembly resulted in a 50.15 Mbp and 60.83 Mbp genome size for UMT-M1 and SE-MC4, respectively. All filtered and assembled genomic data sequences have been submitted to National Centre for Biotechnology Information (NCBI) and can be located at DDBJ/ENA/GenBank under the accession of VJNP00000000 (UMT-M1) and VIYE00000000 (SE-MC4).

SUBMITTER: Teh KY 

PROVIDER: S-EPMC6838400 | biostudies-literature | 2019 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications

<i>De novo</i> whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters.

Teh Kit Yinn KY   Afifudeen C L Wan CLW   Aziz Ahmad A   Wong Li Lian LL   Loh Saw Hong SH   Cha Thye San TS  

Data in brief 20191018


Interest in harvesting potential benefits from microalgae renders it necessary to have the many ecological niches of a single species to be investigated. This dataset comprises <i>de novo</i> whole genome assembly of two mangrove-isolated microalgae (from division Chlorophyta); <i>Chlorella vulgaris</i> UMT-M1 and <i>Messastrum gracile</i> SE-MC4 from Universiti Malaysia Terengganu, Malaysia. Library runs were carried out with 2 × 150 base paired-ends reads, whereas sequencing was conducted usin  ...[more]

Similar Datasets

| S-EPMC4767179 | biostudies-literature
| S-EPMC6145878 | biostudies-literature
| S-EPMC3394722 | biostudies-literature
| S-EPMC6896715 | biostudies-literature
| S-EPMC3046476 | biostudies-literature
| S-EPMC5552983 | biostudies-other
| S-EPMC3712641 | biostudies-literature
| S-EPMC3667984 | biostudies-literature
| S-EPMC4143763 | biostudies-literature
| S-EPMC6375718 | biostudies-literature