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Genome-wide association study of eosinophilic granulomatosis with polyangiitis reveals genomic loci stratified by ANCA status.


ABSTRACT: Eosinophilic granulomatosis with polyangiitis (EGPA) is a rare inflammatory disease of unknown cause. 30% of patients have anti-neutrophil cytoplasmic antibodies (ANCA) specific for myeloperoxidase (MPO). Here, we describe a genome-wide association study in 676 EGPA cases and 6809 controls, that identifies 4 EGPA-associated loci through conventional case-control analysis, and 4 additional associations through a conditional false discovery rate approach. Many variants are also associated with asthma and six are associated with eosinophil count in the general population. Through Mendelian randomisation, we show that a primary tendency to eosinophilia contributes to EGPA susceptibility. Stratification by ANCA reveals that EGPA comprises two genetically and clinically distinct syndromes. MPO+?ANCA EGPA is an eosinophilic autoimmune disease sharing certain clinical features and an HLA-DQ association with MPO+?ANCA-associated vasculitis, while ANCA-negative EGPA may instead have a mucosal/barrier dysfunction origin. Four candidate genes are targets of therapies in development, supporting their exploration in EGPA.

SUBMITTER: Lyons PA 

PROVIDER: S-EPMC6851141 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature

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Genome-wide association study of eosinophilic granulomatosis with polyangiitis reveals genomic loci stratified by ANCA status.

Lyons Paul A PA   Peters James E JE   Alberici Federico F   Liley James J   Coulson Richard M R RMR   Astle William W   Baldini Chiara C   Bonatti Francesco F   Cid Maria C MC   Elding Heather H   Emmi Giacomo G   Epplen Jörg J   Guillevin Loïc L   Jayne David R W DRW   Jiang Tao T   Gunnarsson Iva I   Lamprecht Peter P   Leslie Stephen S   Little Mark A MA   Martorana Davide D   Moosig Frank F   Neumann Thomas T   Ohlsson Sophie S   Quickert Stefanie S   Ramirez Giuseppe A GA   Rewerska Barbara B   Schett Georg G   Sinico Renato A RA   Szczeklik Wojciech W   Tesar Vladimir V   Vukcevic Damjan D   Terrier Benjamin B   Watts Richard A RA   Vaglio Augusto A   Holle Julia U JU   Wallace Chris C   Smith Kenneth G C KGC  

Nature communications 20191112 1


Eosinophilic granulomatosis with polyangiitis (EGPA) is a rare inflammatory disease of unknown cause. 30% of patients have anti-neutrophil cytoplasmic antibodies (ANCA) specific for myeloperoxidase (MPO). Here, we describe a genome-wide association study in 676 EGPA cases and 6809 controls, that identifies 4 EGPA-associated loci through conventional case-control analysis, and 4 additional associations through a conditional false discovery rate approach. Many variants are also associated with ast  ...[more]

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