Reference Genome Anchoring of High-Density Markers for Association Mapping and Genomic Prediction in European Winter Wheat.
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ABSTRACT:
SUBMITTER: Ladejobi O
PROVIDER: S-EPMC6857554 | biostudies-literature | 2019
REPOSITORIES: biostudies-literature
Publications
Reference Genome Anchoring of High-Density Markers for Association Mapping and Genomic Prediction in European Winter Wheat.
Ladejobi Olufunmilayo O Mackay Ian J IJ Poland Jesse J Praud Sebastien S Hibberd Julian M JM Bentley Alison R AR
Frontiers in plant science 20191108
In this study, we anchored genotyping-by-sequencing data to the International Wheat Genome Sequencing Consortium Reference Sequence v1.0 assembly to generate over 40,000 high quality single nucleotide polymorphism markers on a panel of 376 elite European winter wheat varieties released between 1946 and 2007. We compared association mapping and genomic prediction accuracy for a range of productivity traits with previous results based on lower density dominant DArT markers. The results demonstrate ...[more]
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