Dataset Information

Understanding the Genetic Basis of Spike Fertility to Improve Grain Number, Harvest Index, and Grain Yield in Wheat Under High Temperature Stress Environments.

ABSTRACT: Moderate heat stress accompanied by short episodes of extreme heat during the post-anthesis stage is common in most US wheat growing areas and causes substantial yield losses. Sink strength (grain number) is a key yield limiting factor in modern wheat varieties. Increasing spike fertility (SF) and improving the partitioning of assimilates can optimize sink strength which is essential to improve wheat yield potential under a hot and humid environment. A genome-wide association study (GWAS) allows identification of novel quantitative trait loci (QTLs) associated with SF and other partitioning traits that can assist in marker assisted breeding. In this study, GWAS was performed on a soft wheat association mapping panel (SWAMP) comprised of 236 elite lines using 27,466 single nucleotide polymorphisms (SNPs). The panel was phenotyped in two heat stress locations over 3 years. GWAS identified 109 significant marker-trait associations (MTAs) (p ? 9.99 x 10-5) related to eight phenotypic traits including SF (a major component of grain number) and spike harvest index (SHI, a major component of grain weight). MTAs detected on chromosomes 1B, 3A, 3B, and 5A were associated with multiple traits and are potentially important targets for selection. More than half of the significant MTAs (60 out of 109) were found in genes encoding different types of proteins related to metabolism, disease, and abiotic stress including heat stress. These MTAs could be potential targets for further validation study and may be used in marker-assisted breeding for improving wheat grain yield under post-anthesis heat stress conditions. This is the first study to identify novel QTLs associated with SF and SHI which represent the major components of grain number and grain weight, respectively, in wheat.

SUBMITTER: Pradhan S

PROVIDER: S-EPMC6895025 | biostudies-literature | 2019

REPOSITORIES: biostudies-literature

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Publications

Understanding the Genetic Basis of Spike Fertility to Improve Grain Number, Harvest Index, and Grain Yield in Wheat Under High Temperature Stress Environments.

Pradhan Sumit S Babar Md Ali MA Robbins Kelly K Bai Guihua G Mason Richard Esten RE Khan Jahangir J Shahi Dipendra D Avci Muhsin M Guo Jia J Maksud Hossain Mohammad M Bhatta Madhav M Mergoum Mohamed M Asseng Senthold S Amand Paul St PS Gezan Salvador S Baik Byung-Kee BK Blount Ann A Bernardo Amy A

Frontiers in plant science 20191129

Moderate heat stress accompanied by short episodes of extreme heat during the post-anthesis stage is common in most US wheat growing areas and causes substantial yield losses. Sink strength (grain number) is a key yield limiting factor in modern wheat varieties. Increasing spike fertility (SF) and improving the partitioning of assimilates can optimize sink strength which is essential to improve wheat yield potential under a hot and humid environment. A genome-wide association study (GWAS) allows ...[more]

PMID: 31850009

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Project description:Harvest index (HI) is the ratio of grain to total shoot dry matter and is as a measure of reproductive efficiency. HI is determined by interactions between genotypes (G), environment (E), and crop management (M). Historic genetic yield gains due to breeding in wheat have largely been achieved by increasing HI. Environmental factors are important for HI and include seasonal pattern of water supply and extreme temperatures during crop reproductive development. Wheat production in Australia has been dominated by fast-developing spring cultivars that when sown in late-autumn will flower at an optimal time in early spring. Water limited potential yield can be increased by sowing slower developing wheats with a vernalization requirement (winter wheat) earlier than currently practiced such that their development is matched to environment and they flower at the optimal time. This means a longer vegetative phase which increases rooting depth, proportion of water-use transpired, and transpiration efficiency by allowing more growth during winter when vapour pressure deficit is low. All these factors can increase biomass accumulation, grain number and thus grain yield potential. However higher yields are not always realized due to a lower HI of early sown slow developing wheats compared to fast developing wheats sown later. Here, we evaluate genotype × management practices to improve HI and yield in early sown slow developing wheat crops using 6 field experiments conducted across south eastern Australia from 2014 to 2018 in yield environments ranging from ~1 to ~4.7 t/ha. Practices included low plant densities (30-50 plants/m²), mechanical defoliation, and deferred application of nitrogen fertilizer. Lower plant densities had similar yield and HI to higher plant densities. Defoliation tended to increase HI but reduce yield except when there was severe stem frost damage. Deferring nitrogen had a variable effect depending on starting soil N and in crop rainfall. All management strategies evaluated gave variable HI and yield responses with small effect sizes, and we conclude that none of them can reliably increase HI in early sown wheat. We propose that genetic improvement is the most promising avenue for increasing HI and yield in early sown wheat, and postulate that this could be achieved more rapidly through early generation screening for HI in slow developing genotypes than by crop management.

Dataset Information

Understanding the Genetic Basis of Spike Fertility to Improve Grain Number, Harvest Index, and Grain Yield in Wheat Under High Temperature Stress Environments.

Publications

Understanding the Genetic Basis of Spike Fertility to Improve Grain Number, Harvest Index, and Grain Yield in Wheat Under High Temperature Stress Environments.

Similar Datasets

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