Ontology highlight
ABSTRACT:
SUBMITTER: Li B
PROVIDER: S-EPMC6932830 | biostudies-literature | 2019 Dec
REPOSITORIES: biostudies-literature
Li Bowen B Taniguchi Denis D Gedara Jayathilake Pahala JP Gogulancea Valentina V Gonzalez-Cabaleiro Rebeca R Chen Jinju J McGough Andrew Stephen AS Ofiteru Irina Dana ID Curtis Thomas P TP Zuliani Paolo P
PLoS computational biology 20191212 12
We present NUFEB (Newcastle University Frontiers in Engineering Biology), a flexible, efficient, and open source software for simulating the 3D dynamics of microbial communities. The tool is based on the Individual-based Modelling (IbM) approach, where microbes are represented as discrete units and their behaviour changes over time due to a variety of processes. This approach allows us to study population behaviours that emerge from the interaction between individuals and their environment. NUFE ...[more]