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Comprehensive analysis of a mouse model of spontaneous uveoretinitis using single-cell RNA sequencing.


ABSTRACT: Autoimmune uveoretinitis is a significant cause of visual loss, and mouse models offer unique opportunities to study its disease mechanisms. Aire -/- mice fail to express self-antigens in the thymus, exhibit reduced central tolerance, and develop a spontaneous, chronic, and progressive uveoretinitis. Using single-cell RNA sequencing (scRNA-seq), we characterized wild-type and Aire -/- retinas to define, in a comprehensive and unbiased manner, the cell populations and gene expression patterns associated with disease. Based on scRNA-seq, immunostaining, and in situ hybridization, we infer that 1) the dominant effector response in Aire -/- retinas is Th1-driven, 2) a subset of monocytes convert to either a macrophage/microglia state or a dendritic cell state, 3) the development of tertiary lymphoid structures constitutes part of the Aire -/- retinal phenotype, 4) all major resident retinal cell types respond to interferon gamma (IFNG) by changing their patterns of gene expression, and 5) Muller glia up-regulate specific genes in response to IFN gamma and may act as antigen-presenting cells.

SUBMITTER: Heng JS 

PROVIDER: S-EPMC6936593 | biostudies-literature | 2019 Dec

REPOSITORIES: biostudies-literature

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Comprehensive analysis of a mouse model of spontaneous uveoretinitis using single-cell RNA sequencing.

Heng Jacob S JS   Hackett Sean F SF   Stein-O'Brien Genevieve L GL   Winer Briana L BL   Williams John J   Goff Loyal A LA   Nathans Jeremy J  

Proceedings of the National Academy of Sciences of the United States of America 20191216 52


Autoimmune uveoretinitis is a significant cause of visual loss, and mouse models offer unique opportunities to study its disease mechanisms. <i>Aire</i><sup><i>-/-</i></sup> mice fail to express self-antigens in the thymus, exhibit reduced central tolerance, and develop a spontaneous, chronic, and progressive uveoretinitis. Using single-cell RNA sequencing (scRNA-seq), we characterized wild-type and <i>Aire</i><sup><i>-/-</i></sup> retinas to define, in a comprehensive and unbiased manner, the c  ...[more]

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