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Crystal structure, Hirshfeld surface analysis and DFT studies of 1-benzyl-3-[(1-benzyl-1H-1,2,3-triazol-5-yl)meth-yl]-2,3-di-hydro-1H-1,3-benzo-diazol-2-one monohydrate.


ABSTRACT: In the title mol-ecule, C24H21N5O·H2O, the di-hydro-benzo-diazole moiety is not quite planar, while the whole mol-ecule adopts a U-shaped conformation in which there is a close approach of the two benzyl groups. In the crystal, chains of alternating mol-ecules and lattice water extending along [201] are formed by O-HUncoordW?ODhyr and O-HUncoordW?NTrz (UncoordW = uncoordinated water, Dhyr = di-hydro and Trz = triazole) hydrogen bonds. The chains are connected into layers parallel to (010) by C-HTrz?OUncoordW hydrogen bonds with the di-hydro-benzo-diazole units in adjacent layers inter-calating to form head-to-tail ?-stacking [centroid-to-centroid distance = 3.5694?(11)?Å] inter-actions between them, which generates the overall three-dimensional structure. Hirshfeld surface analysis indicates that the most important contributions for the crystal packing are from H?H (52.1%), H?C/C?H (23.8%) and O?H/H?O (11.2%) inter-actions. Hydrogen-bonding and van der Waals inter-actions are the dominant inter-actions in the crystal packing. Density functional theory (DFT) optimized structures at the B3LYP/ 6-311?G(d,p) level are compared with the experimentally determined mol-ecular structure in the solid state. The HOMO-LUMO behaviour was elucidated to determine the energy gap.

SUBMITTER: Saber A 

PROVIDER: S-EPMC6944078 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

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Crystal structure, Hirshfeld surface analysis and DFT studies of 1-benzyl-3-[(1-benzyl-1<i>H</i>-1,2,3-triazol-5-yl)meth-yl]-2,3-di-hydro-1<i>H</i>-1,3-benzo-diazol-2-one monohydrate.

Saber Asmaa A   Sebbar Nada Kheira NK   Hökelek Tuncer T   Labd Taha Mohamed M   Mague Joel T JT   Hamou Ahabchane Noureddine N   Essassi El Mokhtar EM  

Acta crystallographica. Section E, Crystallographic communications 20200101 Pt 1


In the title mol-ecule, C<sub>24</sub>H<sub>21</sub>N<sub>5</sub>O·H<sub>2</sub>O, the di-hydro-benzo-diazole moiety is not quite planar, while the whole mol-ecule adopts a U-shaped conformation in which there is a close approach of the two benzyl groups. In the crystal, chains of alternating mol-ecules and lattice water extending along [201] are formed by O-H<sub>UncoordW</sub>⋯O<sub>Dhyr</sub> and O-H<sub>UncoordW</sub>⋯N<sub>Trz</sub> (UncoordW = uncoordinated water, Dhyr = di-hydro and Trz =  ...[more]

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