RNA CoSSMos 2.0: an improved searchable database of secondary structure motifs in RNA three-dimensional structures.

ABSTRACT: The RNA Characterization of Secondary Structure Motifs, RNA CoSSMos, database is a freely accessible online database that allows users to identify secondary structure motifs among RNA 3D structures and explore their structural features. RNA CoSSMos 2.0 now requires two closing base pairs for all RNA loop motifs to create a less redundant database of secondary structures. Furthermore, RNA CoSSMos 2.0 represents an upgraded database with new features that summarize search findings and aid in the search for 3D structural patterns among RNA secondary structure motifs. Previously, users were limited to viewing search results individually, with no built-in tools to compare search results. RNA CoSSMos 2.0 provides two new features, allowing users to summarize, analyze and compare their search res

SUBMITTER: Richardson KE 

PROVIDER: S-EPMC6966092 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature