A proposed core genome scheme for analyses of the Salmonella genus.
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ABSTRACT:
SUBMITTER: Pearce ME
PROVIDER: S-EPMC6978875 | biostudies-literature | 2020 Jan
REPOSITORIES: biostudies-literature
Publications
A proposed core genome scheme for analyses of the Salmonella genus.
Pearce Madison E ME Chattaway Marie A MA Grant Kathie K Maiden Martin C J MCJ
Genomics 20190321 1
The salmonellae are found in a wide range of animal hosts and many food products for human consumption. Most cases of human disease are caused by S. enterica subspecies I; however as opportunistic pathogens the other subspecies (II-VI) and S. bongori are capable of causing disease. Loci that were not consistently present in all of the species and subspecies were removed from a previously proposed core genome scheme (EBcgMLSTv2.0), the removal of these 252 loci resulted in a core genus scheme (Sa ...[more]
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