Browse
Submit Data
Databases
API
Help

Dataset Information

34 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of Salmonella enterica Siphophage Shemara.

ABSTRACT: Here, we present the annotated genome of Shemara, a siphophage of Salmonella enterica The Shemara genome is 44 kb with 83 predicted protein-coding genes. At the nucleotide and amino acid levels, Shemara is most similar to phages in the Guernseyvirinae subfamily.

SUBMITTER: Chung M

PROVIDER: S-EPMC7005123 | biostudies-literature | 2020 Feb

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Complete Genome Sequence of Salmonella enterica Siphophage Shemara.

Chung Michael M Xie Yicheng Y Newkirk Heather H Liu Mei M Gill Jason J JJ Ramsey Jolene J

Microbiology resource announcements 20200206 6

Here, we present the annotated genome of Shemara, a siphophage of <i>Salmonella enterica</i> The Shemara genome is 44 kb with 83 predicted protein-coding genes. At the nucleotide and amino acid levels, Shemara is most similar to phages in the <i>Guernseyvirinae</i> subfamily. ...[more]

PMID: 32029558

Similar Datasets

Complete Genome Sequence of Salmonella enterica Siphophage Shelanagig.

Project description:Salmonella enterica is a Gram-negative human pathogen widely known to cause food poisoning. Here, the genome of S. enterica phage Shelanagig is described. Its 42,541-bp genome codes for 68 proteins, for which 33 were assigned a predicted function. Shelanagig shares high similarity at the protein level with other Salmonella phages.

| S-EPMC6763656 | biostudies-literature

Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Siphophage Seabear.

Project description:Salmonella enterica serovar Typhimurium is a foodborne pathogen that causes gastroenteritis. Due to increases in antibiotic resistance, bacteriophage therapy may be an alternative method for preventing Salmonella foodborne infections. We report here the complete genome sequence of a T5-like phage, Seabear, which was isolated against S. Typhimurium.

| S-EPMC6813398 | biostudies-literature

Complete Genome Sequence of Salmonella enterica Serovar Heidelberg Siphophage Sepoy.

Project description:Phage Sepoy infects Salmonella enterica serovar Heidelberg, a Gram-negative bacterium that causes severe foodborne illnesses. Bacteriophages infecting this pathogen may be used as biocontrol agents for preventing Salmonella foodborne diseases. Here, we present the complete genome sequence of Sepoy, a T5-like siphophage.

| S-EPMC6658699 | biostudies-literature

Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Siphophage Shivani.

Project description:Here, we describe the complete genome sequence of siphophage Shivani, a T5-like constituent phage in the therapeutic phage cocktail IntestiPhage developed for bacterial gastroenteritis. Shivani was isolated against a foodborne pathogen, Salmonella enterica, which is one of the leading causes of gastroenteritis.

| S-EPMC4342426 | biostudies-literature

Complete Genome Sequence of Salmonella enterica Serovar Enteritidis Siphophage Seafire.

Project description:Bacteriophages infecting Salmonella enterica subsp. enterica serovar Enteritidis may be used as biocontrol agents in food products or animals for preventing foodborne diseases caused by this pathogen. The complete genome sequence of phage Seafire, a T5-like siphophage infecting S. Enteritidis, is described in this report.

| S-EPMC6813399 | biostudies-literature

Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Siphophage Skate.

Project description:Salmonella enterica serovar Typhimurium is a Gram-negative pathogen and a primary cause of foodborne illnesses worldwide. Here, we present the complete 47,393-bp genome sequence of the siphophage Skate, which was isolated against S. Typhimurium strain LT2.

| S-EPMC6606912 | biostudies-literature

Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Siphophage Siskin.

Project description:Bacteriophage Siskin is a member of the χ-like siphovirus phage cluster that infects Salmonella enterica serovar Typhimurium strain LT2. Here, we report the complete 58,476-bp sequence of the Siskin genome, provide confirmation of its genomic termini, and describe a potentially new class of holins and endolysins found in the lysis cassette.

| S-EPMC6498227 | biostudies-literature

Complete Genome of Salmonella enterica Serovar Typhimurium T5-Like Siphophage Stitch.

Project description:Salmonellosis, caused by Salmonella, is a leading cause of food poisoning worldwide. With the continuing rise of bacterial antibiotic resistance, efforts are focused on seeking new approaches for treatment of bacterial infections, namely, bacteriophage therapy. Here, we report the complete genome of S. Typhimurium siphophage Stitch.

| S-EPMC4319617 | biostudies-literature

Complete Genome Sequence of Salmonella enterica Myophage Matapan.

Project description:Here, we describe the Salmonella enterica serovar Heidelberg phage Matapan. A myophage with a 157,408-kb genome, Matapan is most closely related to Vi01-like phages.

| S-EPMC6753281 | biostudies-literature

Complete Genome Sequence of Salmonella enterica subsp. enterica serovar Minnesota Strain

Project description:Abstract Mango has been implicated as food vehicle in several Salmonella-causing foodborne outbreaks. Here, Salmonella enterica subsp. enterica serovar Minnesota was isolated from fresh mango fruit imported from Mexico in 2014. The complete genome sequence of S. Minnesota CFSAN017963 was sequenced using single-molecule real-time DNA sequencing. Distinct prophage regions, Salmonella pathogenicity islands, and fimbrial gene clusters were observed in comparative genomic analysis on S. Minnesota CFSAN017963 with other phylogenetically closely related Salmonella serovars. Core genome multilocus sequencing typing analysis of all the S. Minnesota isolates in the Genbank and Enterobase also revealed a high genomic diversity among the genomes analyzed.

| S-EPMC5647791 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data