Dataset Information

Genetic Parameters for Growth and Kid Survival of Indigenous Goat under Smallholding System of Burundi.

ABSTRACT: The goal of this study was to estimate genetic parameters for the growth, conformation, and survival of goat kids raised in smallholder farming systems in Burundi. To do this, measurements were taken on live weight, thoracic perimeter, length, and height at birth (n = 1538 animals), at 3 months (n = 1270 animals), at 6 months (n = 992 animals), at 9 months (n = 787 animals), and at 12 months (n = 705 animals). Kids were born between 2016 and 2019, from 645 dams and 106 bucks. Three bivariate animal models were used to estimate genetic parameters of body weight and conformation measurements as potential indicators of this weight. According to the measure, heritability was estimated between 15 and 17% and genetic correlations between 65 and 79%. An accelerated failure time animal model was used to estimate the heritability of survival for kids under one year, adjusted for birth weight. Goat survival was significantly prolonged by 0.64 days per kilogram of birth weight. The estimated heritability for this trait was 2%. Overall, these results suggest that a selection program could be implemented to improve animal growth, either directly on weight or indirectly on conformational traits. At the same time, efforts need to be made to improve rearing conditions to increase the survival of kids.

SUBMITTER: Josiane M

PROVIDER: S-EPMC7023424 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

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Genetic Parameters for Growth and Kid Survival of Indigenous Goat under Smallholding System of Burundi.

Josiane Manirakiza M Gilbert Hatungumukama H Johann Detilleux D

Animals : an open access journal from MDPI 20200115 1

The goal of this study was to estimate genetic parameters for the growth, conformation, and survival of goat kids raised in smallholder farming systems in Burundi. To do this, measurements were taken on live weight, thoracic perimeter, length, and height at birth (n = 1538 animals), at 3 months (n = 1270 animals), at 6 months (n = 992 animals), at 9 months (n = 787 animals), and at 12 months (n = 705 animals). Kids were born between 2016 and 2019, from 645 dams and 106 bucks. Three bivariate ani ...[more]

PMID: 31952116

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Project description:In Africa, extensively raised livestock populations in most smallholder farming communities are exposed to harsh and heterogeneous climatic conditions and disease pathogens that they adapt to in order to survive. Majority of these livestock species, including goats, are of non-descript and uncharacterized breeds and their response to natural selection presented by heterogeneous environments is still unresolved. This study investigated genetic diversity and its association with environmental and geographic conditions in 194 South African indigenous goats from different geographic locations genotyped on the Illumina goat SNP50K panel. Population structure analysis revealed a homogeneous genetic cluster of the Tankwa goats, restricted to the Northern Cape province. Overall, the Boer, Kalahari Red, and Savanna showed a wide geographic spread of shared genetic components, whereas the village ecotypes revealed a longitudinal distribution. The relative importance of environmental factors on genetic variation of goat populations was assessed using redundancy analysis (RDA). Climatic and geographic variables explained 22% of the total variation while climatic variables alone accounted for 17% of the diversity. Geographic variables solitarily explained 1% of the total variation. The first axis (Model I) of the RDA analysis revealed 329 outlier SNPs. Landscape genomic approaches of spatial analysis method (SAM) identified a total of 843 (1.75%) SNPs, while latent factor mixed models (LFMM) identified 714 (1.48%) SNPs significantly associated with environmental variables. Significant markers were within genes involved in biological functions potentially important for environmental adaptation. Overall, the study suggested environmental factors to have some effect in shaping the genetic variation of South African indigenous goat populations. Loci observed to be significant and under selection may be responsible for the adaption of the goat populations to local production systems.

Dataset Information

Genetic Parameters for Growth and Kid Survival of Indigenous Goat under Smallholding System of Burundi.

Publications

Genetic Parameters for Growth and Kid Survival of Indigenous Goat under Smallholding System of Burundi.

Similar Datasets

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