Dataset Information

Metabolomics Analysis of the Peels of Different Colored Citrus Fruits (Citrus reticulata cv. 'Shatangju') During the Maturation Period Based on UHPLC-QQQ-MS.

ABSTRACT: Citrus is a globally consumed fruit with great popularity. Mandarin (Citrus reticulata cv. 'Shatangju') is a local variety, and its planting area and yield are the greatest regarding fruit tree planting in Guangdong Province, China. However, its resistance to Huanglongbing (HLB) is weak. After infection by HLB, the fruits cannot develop normally. In this study, four kinds of fruits were classified as HBG, XQG, ZQG, and DHG, according to the color of their peels. The metabolomes of the three abnormally colored groups (HBG, XQG, and ZQG) and the normally colored group (DHG) were compared using a UPLC-QQQ-MS-based metabolomics approach. In total, 913 metabolites were identified and classified into 23 different categories, including phenylpropanoids and flavonoids; among them, 215 (HBG, 177; XQG, 124; and ZQG, 62) metabolites showed differential accumulation in the three comparison groups (HBG/XQG/ZQG versus DHG). A total of 2 unique metabolites, O-caffeoyl maltotriose and myricetin were detected only in DHG samples. When comparing HBG with DHG, there were 109 decreased and 68 increased metabolites; comparing XQG with DHG, there were 88 decreased and 36 increased metabolites; comparing ZQG with DHG, 41 metabolites were decreased, and 21 metabolites were increased. Metabolic pathway enrichment analysis of these differential metabolites showed significant enrichment of the "phenylpropanoid biosynthesis" pathway in all comparison groups. The hierarchical cluster analysis of the differential metabolites of the four groups showed a clear grouping patterns. The relative contents of three phenylpropanoids, four flavonoids, two alkaloids, one anthocyanin, and two other metabolites were significantly different between each comparison group. This study might provide fundamental insight for the isolation and identification of functional compounds from the peels of citrus fruit infected with HLB and for in-depth research on the effect of HLB on the formation of fruits pigment and the development of HLB-resistant citrus varieties.

SUBMITTER: Wang F

PROVIDER: S-EPMC7024170 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

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Metabolomics Analysis of the Peels of Different Colored Citrus Fruits (<i>Citrus reticulata</i> cv. 'Shatangju') During the Maturation Period Based on UHPLC-QQQ-MS.

Wang Feiyan F Huang Yongjing Y Wu Wen W Zhu Congyi C Zhang Ruimin R Chen Jiezhong J Zeng Jiwu J

Molecules (Basel, Switzerland) 20200117 2

Citrus is a globally consumed fruit with great popularity. Mandarin (<i>Citrus reticulata</i> cv. 'Shatangju') is a local variety, and its planting area and yield are the greatest regarding fruit tree planting in Guangdong Province, China. However, its resistance to Huanglongbing (HLB) is weak. After infection by HLB, the fruits cannot develop normally. In this study, four kinds of fruits were classified as HBG, XQG, ZQG, and DHG, according to the color of their peels. The metabolomes of the thr ...[more]

PMID: 31963595

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Project description:Carbonization of agricultural and forestry wastes is the main use of biochar application in agriculture. In this study, the effects of biochar on the physical and chemical properties of soil and diversity in rhizosphere microorganisms, leaf nutrients and fruit quality of acid red soil in "Shatangju" (Citrus reticulate cv.) orchard were studied using organic wastes and small-scale carbonization furnaces from orchards were used to produce biochar. The results showed that the finished rate of biochar produced from the organic wastes in the orchard was approximately 37%, and the carbon content of the finished product was as high as 80%. The results suggested that the biochar produced in the orchard could meet the annual consumption of the orchard. Applying biochar can improve the physical and chemical properties of acid soil in the "Shatangju" orchard by enhancing the availability of various mineral nutrients such as nitrogen, phosphorus, potassium, calcium, magnesium and boron. The species and quantity of root and rhizosphere microbial communities (fungi, bacteria and archaea) increased, and the dominant bacterial group changed, manifested in the increase in microbial diversity. Biochar directly affected the soil pH value and increased the soil organic carbon content, which may be the main reason for the change in microbial diversity in the soil and rhizosphere of "Shatangju" in the orchard and pot tests. The fruit quality of each treatment group with biochar was also better than that of the control group and improved fruit coloring. In the pure soil test, whether or not chemical fertilizer was applied, 3% biochar amendments can provide a suitable pH value for "Shatangju" growth and are relatively stable. Regardless of whether or not fertilizer was applied, 1.5%-3% biochar improved the soil in the pot test. In the field, the biochar at a rate of 2.4 kg/plant to 3.6 kg/plant, respectively, was the best in improving soil physical and chemical properties, foliar nutrition and fruit quality. Therefore, the amount of biochar added in the open environment (if the garden) can be slightly adjusted according to the results of the closed environment test (pure soil test and pot test). In this experiment, we explored the self-recycling of organic carbon, mainly through the preparation of a simple small-scale biochar furnace suitable for the use by orchards, and selected the appropriate amount of biochar to improve the physical and chemical conditions of "Shatangju" orchard soil and increase fruit quality.

Project description:The peels extracted from various citrus species are major source of phenols, flavonoids and anti-microbial agents. The purpose of this study was a detailed investigation of the phytochemical and pharmacological character of the ethanolic (80%), methanolic and acetone extracts of the peel of local variants of orange (lemon, grape fruit, mousami, fruiter, and shikri malta). The extracts were studied to find out the total phenolic contents (TPC), and total flavonoids (TF) present. The antioxidant activities were assessed by 2,2-diphenyl-1-picrylhydrazyl (DPPH) scavenging effect, and the reducing power was determined through free radical scavenging activity (FRAP) assays. The sensitivity of four bacterial strains to peels extracts was examined by applying the diffusion disc on agar medium method. It was found that ethanol was the best extracting agent for TPC and TF in fruit peels under study. The highest TPC (21.33 ± 0.06 mg GAE/g) was quantified in orange peels, whereas fruiter contained the lowest TPC (20.40 ± 0.03 mg GAE/g) in ethanolic extract. The highest amount of TF (2.02 ± 0.08 mg QE/g) was quantified in lemon peels, whereas shikri malta contained lowest quantity of TF (1.04 ± 0.02 mg QE/g). The highest free radical scavenging activity (93.1%) of DPPH was exhibited by lemon peels, whereas the least activity (78.6%) was shown by mousami peels. Ethanolic extract of orange peels demonstrated more reducing power while showing an absorption of 1.98, followed by methanolic (1.11) and acetone (0.81) extracts. The inhibition effect of methanolic extract of lemon peels (inhibition zone = 18 mm) against B. subtilis was considerable and comparable to that of ciprofloxacin. Gas chromatography/mass spectrometry (GC/MS) was used to detect the compounds in ethanolic extract and up to 14 compounds were detected. These compounds were also assessed for their docking scores. Plausible binding modes with polyphenol oxidase and four best compounds were selected for molecular dynamics (MD) simulation to analyze their structural stability with receptor.

Dataset Information

Metabolomics Analysis of the Peels of Different Colored Citrus Fruits (Citrus reticulata cv. 'Shatangju') During the Maturation Period Based on UHPLC-QQQ-MS.

Publications

Metabolomics Analysis of the Peels of Different Colored Citrus Fruits (<i>Citrus reticulata</i> cv. 'Shatangju') During the Maturation Period Based on UHPLC-QQQ-MS.

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