Dataset Information

Development of an autophagy-related gene expression signature for prognosis prediction in prostate cancer patients.

ABSTRACT: BACKGROUND:Prostate cancer (PCa) is one of the most prevalent cancers that occur in men worldwide. Autophagy-related genes (ARGs) may play an essential role in multiple biological processes of prostate cancer. However, ARGs expression signature has rarely been used to investigate the association between autophagy and prognosis in PCa. This study aimed to identify and assess prognostic ARGs signature to predict overall survival (OS) and disease-free survival (DFS) in PCa patients. METHODS:First, a total of 234 autophagy-related genes were obtained from The Human Autophagy Database. Then, differentially expressed ARGs were identified in prostate cancer patients based on The Cancer Genome Atlas (TCGA) database. The univariate and multivariate Cox regression analysis was performed to screen hub prognostic ARGs for overall survival and disease-free survival, and the prognostic model was constructed. Finally, the correlation between the prognostic model and clinicopathological parameters was further analyzed, including age, T status, N status, and Gleason score. RESULTS:The OS-related prognostic model was constructed based on the five ARGs (FAM215A, FDD, MYC, RHEB, and ATG16L1) and significantly stratified prostate cancer patients into high- and low-risk groups in terms of OS (HR?=?6.391, 95% CI?=?1.581- 25.840, P? 7 than??? 7 (P?=?0.015). In addition, the DFS-related prognostic model was constructed based on the 22 ARGs (ULK2, NLRC4, MAPK1, ATG4D, MAPK3, ATG2A, ATG9B, FOXO1, PTEN, HDAC6, PRKN, HSPB8, P4HB, MAP2K7, MTOR, RHEB, TSC1, BIRC5, RGS19, RAB24, PTK6, and NRG2), with AUC of 0.85 (HR?=?7.407, 95% CI?=?4.850-11.320, P?

SUBMITTER: Hu D

PROVIDER: S-EPMC7137440 | biostudies-literature | 2020 Apr

REPOSITORIES: biostudies-literature

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Development of an autophagy-related gene expression signature for prognosis prediction in prostate cancer patients.

Hu Daixing D Jiang Li L Luo Shengjun S Zhao Xin X Hu Hao H Zhao Guozhi G Tang Wei W

Journal of translational medicine 20200407 1

<h4>Background</h4>Prostate cancer (PCa) is one of the most prevalent cancers that occur in men worldwide. Autophagy-related genes (ARGs) may play an essential role in multiple biological processes of prostate cancer. However, ARGs expression signature has rarely been used to investigate the association between autophagy and prognosis in PCa. This study aimed to identify and assess prognostic ARGs signature to predict overall survival (OS) and disease-free survival (DFS) in PCa patients.<h4>Meth ...[more]

PMID: 32264916

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Dataset Information

Development of an autophagy-related gene expression signature for prognosis prediction in prostate cancer patients.

Publications

Development of an autophagy-related gene expression signature for prognosis prediction in prostate cancer patients.

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