NLGenomeSweeper: A Tool for Genome-Wide NBS-LRR Resistance Gene Identification.
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ABSTRACT:
SUBMITTER: Toda N
PROVIDER: S-EPMC7141099 | biostudies-literature | 2020 Mar
REPOSITORIES: biostudies-literature
Publications
NLGenomeSweeper: A Tool for Genome-Wide NBS-LRR Resistance Gene Identification.
Toda Nicholas N Rustenholz Camille C Baud Agnès A Le Paslier Marie-Christine MC Amselem Joelle J Merdinoglu Didier D Faivre-Rampant Patricia P
Genes 20200320 3
Although there are a number of bioinformatic tools to identify plant nucleotide-binding leucine-rich repeat (NLR) disease resistance genes based on conserved protein sequences, only a few of these tools have attempted to identify disease resistance genes that have not been annotated in the genome. The overall goal of the NLGenomeSweeper pipeline is to annotate NLR disease resistance genes, including RPW8, in the genome assembly with high specificity and a focus on complete functional genes. This ...[more]
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