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Buoyancy-Free Janus Microcylinders as Mobile Microelectrode Arrays for Continuous Microfluidic Biomolecule Collection within a Wide Frequency Range: A Numerical Simulation Study.

ABSTRACT: We numerically study herein the AC electrokinetic motion of Janus mobile microelectrode (ME) arrays in electrolyte solution in a wide field frequency, which holds great potential for biomedical applications. A fully coupled physical model, which incorporates the fluid-structure interaction under the synergy of induced-charge electroosmotic (ICEO) slipping and interfacial Maxwell stress, is developed for this purpose. A freely suspended Janus cylinder free from buoyancy, whose main body is made of polystyrene, while half of the particle surface is coated with a thin conducting film of negligible thickness, will react actively on application of an AC signal. In the low-frequency limit, induced-charge electrophoretic (ICEP) translation occurs due to symmetric breaking in ICEO slipping, which renders the insulating end to move ahead. At higher field frequencies, a brand-new electrokinetic transport phenomenon called "ego-dielectrophoresis (e-DEP)" arises due to the action of the localized uneven field on the inhomogeneous particle dipole moment. In stark contrast with the low-frequency ICEP translation, the high-frequency e-DEP force tends to drive the asymmetric dipole moment to move in the direction of the conducting end. The bidirectional transport feature of Janus microspheres in a wide AC frequency range can be vividly interpreted as an array of ME for continuous loading of secondary bioparticles from the surrounding liquid medium along its direction-controllable path by long-range electroconvection. These results pave the way for achieving flexible and high-throughput on-chip extraction of nanoscale biological contents for subsequent on-site bioassay based upon AC electrokinetics of Janus ME arrays.

SUBMITTER: Liu W

PROVIDER: S-EPMC7142959 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:High-density microelectrode arrays can be used to record extracellular action potentials from hundreds to thousands of neurons simultaneously. Efficient spike sorters must be developed to cope with such large data volumes. Most existing spike sorting methods for single electrodes or small multielectrodes, however, suffer from the "curse of dimensionality" and cannot be directly applied to recordings with hundreds of electrodes. This holds particularly true for the standard reference spike sorting algorithm, principal component analysis-based feature extraction, followed by k-means or expectation maximization clustering, against which most spike sorters are evaluated. We present a spike sorting algorithm that circumvents the dimensionality problem by sorting local groups of electrodes independently with classical spike sorting approaches. It is scalable to any number of recording electrodes and well suited for parallel computing. The combination of data prewhitening before the principal component analysis-based extraction and a parameter-free clustering algorithm obviated the need for parameter adjustments. We evaluated its performance using surrogate data in which we systematically varied spike amplitudes and spike rates and that were generated by inserting template spikes into the voltage traces of real recordings. In a direct comparison, our algorithm could compete with existing state-of-the-art spike sorters in terms of sensitivity and precision, while parameter adjustment or manual cluster curation was not required. NEW & NOTEWORTHY We present an automatic spike sorting algorithm that combines three strategies to scale classical spike sorting techniques for high-density microelectrode arrays: 1) splitting the recording electrodes into small groups and sorting them independently; 2) clustering a subset of spikes and classifying the rest to limit computation time; and 3) prewhitening the spike waveforms to enable the use of parameter-free clustering. Finally, we combined these strategies into an automatic spike sorter that is competitive with state-of-the-art spike sorters.

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Buoyancy-Free Janus Microcylinders as Mobile Microelectrode Arrays for Continuous Microfluidic Biomolecule Collection within a Wide Frequency Range: A Numerical Simulation Study.

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