Browse
Submit Data
Databases
API
Help

Dataset Information

28 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of Staphylococcus aureus Phage SA75, Isolated from Goat Feces.

ABSTRACT: Antibiotic-resistant Staphylococcus aureus is an opportunistic pathogen causing serious human infections worldwide. Here, we report the complete annotated genome of bacteriophage SA75, a member of the Siphoviridae family which could be an alternative to traditional antibiotics for treating Staphylococcus infections. We used a hybrid approach combining MinION and Illumina MiSeq sequencing, which yielded a 43,134-bp genome and 65 open reading frames.

SUBMITTER: D'Souza R

PROVIDER: S-EPMC7163009 | biostudies-literature | 2020 Apr

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Complete Genome Sequence of Staphylococcus aureus Phage SA75, Isolated from Goat Feces.

D'Souza Roshan R White Richard C RC Buzzeo Rachel R Goglin Karrie K Vashee Sanjay S Lee Yoona Y Son Bokyung B Ryu Sangryeol S Fouts Derrick E DE

Microbiology resource announcements 20200416 16

Antibiotic-resistant Staphylococcus aureus is an opportunistic pathogen causing serious human infections worldwide. Here, we report the complete annotated genome of bacteriophage SA75, a member of the Siphoviridae family which could be an alternative to traditional antibiotics for treating Staphylococcus infections. We used a hybrid approach combining MinION and Illumina MiSeq sequencing, which yielded a 43,134-bp genome and 65 open reading frames. ...[more]

PMID: 32299871

Similar Datasets

Complete Genome Sequence of Staphylococcus aureus Phage GRCS.

Project description:The Staphylococcus aureus phage GRCS was isolated from a sewage treatment facility in India and has shown potential for phage therapy in a mouse model of bacteremia. Here, we report the complete genome sequence of this bacteriophage.

| S-EPMC3983291 | biostudies-literature

Complete Genome Sequence of Staphylococcus aureus Siphovirus Phage JS01.

Project description:Staphylococcus aureus is the most prevalent and economically significant pathogen causing bovine mastitis. We isolated and characterized one staphylophage from the milk of mastitis-affected cattle and sequenced its genome. Transmission electron microscopy (TEM) observation shows that it belongs to the family Siphovirus. We announce here its complete genome sequence and report major findings from the genomic analysis.

| S-EPMC3828307 | biostudies-literature

Complete genome sequence of wide-host-range Staphylococcus aureus phage JD007.

Project description:Methicillin-resistant Staphylococcus aureus-related infections have become a serious problem worldwide. Bacteriophage therapy is an alternative approach against this threat. S. aureus phage JD007, which belongs to the Myoviridae family according to transmission electron microscopic imaging, could lyse nearly 30% of the S. aureus strains from Ruijin Hospital, Shanghai, China, and was isolated from chicken feces in Shanghai, China. The complete genome showed that JD007 is a linear, double-stranded DNA phage 141,836 bp in length with a GC content of 30.4% encoding 217 open reading frames. A BLAST search of the JD007 genome revealed that it was very similar to that of phage GH15.

| S-EPMC3503062 | biostudies-literature

Complete genome of Staphylococcus aureus phage SA11.

Project description:A novel lytic bacteriophage, SA11, infecting Staphylococcus aureus was isolated, and the whole genome was sequenced. It belongs to the siphoviridae based on electron microscopic observation. It has a linear double-stranded DNA genome of 136,326 bp. Genomic analysis showed that it is distantly related to Staphylococcus phages A5W, K, ISP, Sb-1, and G1.

| S-EPMC3446589 | biostudies-literature

Complete Genome Sequence of Escherichia coli O157:H7 Phage UAE_MI-01, Isolated from Bird Feces.

Project description:Bacteriophage UAE_MI-01 is an Escherichia coli O157:H7 phage that was isolated from the feces of wild pigeons (Columba livia domestica) in Abu Dhabi, United Arab Emirates. All previously reported E. coli O157:H7 phages were isolated from ruminants. Here, we report the genetic features of this phage based on its complete genome sequence. UAE_MI-01 has the potential to be used as a therapeutic agent and as an industrial food preservative.

| S-EPMC8281071 | biostudies-literature

Complete Genome Sequence of Super Biofilm-Elaborating Staphylococcus aureus Isolated in Japan.

Project description:Staphylococcus aureus JP080, previously named TF2758, is a clinical isolate from an atheroma and a super biofilm-elaborating strain whose biofilm elaboration is dependent solely on polysaccharide poly-N-acetylglucosamine/polysaccharide intercellular adhesin (PNAG/PIA). Here, we report the complete genome sequence of strain JP080, which consists of one chromosome and one circular plasmid.

| S-EPMC5637496 | biostudies-literature

Complete genome sequence of Staphylococcus aureus bacteriophage GH15.

Project description:GH15 is a polyvalent phage that shows activity against a wide range of Staphylococcus aureus strains. In this work, the complete genome sequence of GH15 was determined. With a genome size of 139,806 bp (double-stranded DNA), GH15 is the largest staphylococcal phage sequenced to date. The complete genome encodes 214 open reading frames (ORFs) and 4 tRNAs. The closest relatives are the class III staphylococcal myobacteriophages, including K, A5W, ISP, Sb-1, and G1. Interestingly, although corresponding gene sequences demonstrate very high similarity, all the introns and inteins present in the phages listed above are absent in GH15. As such, GH15 can be considered phylogenetically unique among the staphylococcal myobacteriophages, indicating the diversity of this family.

| S-EPMC3421715 | biostudies-literature

Complete Genome Sequence of Staphylococcus aureus Siphophage Sebago.

Project description:Here, we introduce the genome of Sebago, a 43,878-bp siphophage that infects Staphylococcus aureus Sebago carries 70 proteins and is most closely related to StauST398, a Phietavirus.

| S-EPMC6639632 | biostudies-literature

Complete Genome Sequence of Staphylococcus aureus Siphophage Lorac.

Project description:Staphylococcus aureus is a leading cause of a wide range of clinical infections. Here, we announce the complete genome sequence of S. aureus siphophage Lorac, a phiETA-like temperate phage that is similar at the nucleotide level to the previously described S. aureus prophage phiNM2.

| S-EPMC6606916 | biostudies-literature

Complete Genome Sequence of Staphylococcus aureus Myophage Maine.

Project description:Multidrug-resistant strains of Staphylococcus aureus cause serious human disease worldwide. Bacteriophages offer a promising alternative to traditional antibiotics. Here, we announce the 141,712-bp genome of S. aureus phage Maine. A myophage with 9,019-bp predicted terminal repeats and high similarity to other Staphylococcus phages, Maine falls into the Twort-like group.

| S-EPMC6776783 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data