Dataset Information

Leaf status and environmental signals jointly regulate proline metabolism in winter oilseed rape.

ABSTRACT: Proline metabolism is an essential component of plant adaptation to multiple environmental stress conditions that is also known to participate in specific developmental phases, particularly in reproductive organs. Recent evidence suggested a possible role for proline catabolism in Brassica napus for nitrogen remobilization processes from source leaves at the vegetative stage. Here, we investigate transcript levels of ?1-PYRROLINE-5-CARBOXYLATE SYNTHASE (P5CS) and PROLINE DEHYDROGENASE (ProDH) genes at the vegetative stage with respect to net proline biosynthesis and degradation fluxes in leaves having a different sink/source balance. We showed that the underexpression of three P5CS1 genes in source leaves was accompanied by a reduced commitment of de novo assimilated 15N towards proline biosynthesis and an overall depletion of free proline content. We found that the expression of ProDH genes was strongly induced by carbon starvation conditions (dark-induced senescence) compared with early senescing leaves. Our results suggested a role for proline catabolism in B. napus, but acting only at a late stage of senescence. In addition, we also identified some P5CS and ProDH genes that were differentially expressed during multiple processes (leaf status, dark to light transition, and stress response).

SUBMITTER: Dellero Y

PROVIDER: S-EPMC7242077 | biostudies-literature | 2020 Mar

REPOSITORIES: biostudies-literature

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Leaf status and environmental signals jointly regulate proline metabolism in winter oilseed rape.

Dellero Younes Y Clouet Vanessa V Marnet Nathalie N Pellizzaro Anthoni A Dechaumet Sylvain S Niogret Marie-Françoise MF Bouchereau Alain A

Journal of experimental botany 20200301 6

Proline metabolism is an essential component of plant adaptation to multiple environmental stress conditions that is also known to participate in specific developmental phases, particularly in reproductive organs. Recent evidence suggested a possible role for proline catabolism in Brassica napus for nitrogen remobilization processes from source leaves at the vegetative stage. Here, we investigate transcript levels of Δ1-PYRROLINE-5-CARBOXYLATE SYNTHASE (P5CS) and PROLINE DEHYDROGENASE (ProDH) ge ...[more]

PMID: 31807778

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Project description:Because sulfur (S) depletion in soil results in seed yield losses and grain quality degradation, especially in high S-demanding crops such as oilseed rape (Brassica napus L.), monitoring S fertilisation has become a central issue. Crop models can be efficient tools to conduct virtual experiments under different fertilisation management strategies. Using the process-based model SuMoToRI, we aimed to analyse the impact of different S fertilisation strategies coupled with the variablility observed in major plant characteristics in oilseed rape i.e. radiation use efficiency (RUE), carbon (C) allocation to the leaves (?) and specific leaf area (SLA) on plant performance-driven variables encompassing total biomass (TDW), S in the photosynthetic leaves (QSmobile.GL) and leaf area index (LAIGL). The contrasting S supply conditions differed in the amount of S (5 levels), and the timing of application (at bolting and/or at flowering, which included a fractioned condition). For this purpose, we performed a global sensitivity analysis (GSA) and calculated two sensitivity indices i.e. the Partial Raw Correlation Coefficient (PRCC) and the Sobol index. The results showed that whatever the timing of S supply, TDW, LAIGL and QSmobile.GL increased as S input increased. For a given S supply, there was no difference in TDW, LAIGL and QSmobile.GL between a single and a fractioned supply. Moreover, delaying the supply until flowering reduced the TDW and LAIGL whereas QSmobile.GL increased. Results showed that RUE had the greatest impact on TDW under all levels of S supply and all application timings, followed by ? and SLA. RUE mostly impacted on QSmobile.GL, depending on S supply conditions, whereas it was the parameter with the least impact on LAIGL. Ultimately, our results provide strong evidence of optimised S fertilisation timings and plant characteristics that will guide producers in their agricultural practices by using specific varieties under constrained S fertilisation strategies.

Project description:Seed germination is a complex trait determined by the interaction of hormonal, metabolic, genetic, and environmental components. Variability of this trait in crops has a big impact on seedling establishment and yield in the field. Classical studies of this trait in crops have focused mainly on the analyses of one level of regulation in the cascade of events leading to seed germination. We have carried out an integrative and extensive approach to deepen our understanding of seed germination in Brassica napus by generating transcriptomic, metabolic and hormonal data at different stages upon seed imbibition. Deep phenotyping of different seed germination associated traits in six winter-type B. napus accessions has revealed that seed germination kinetics, in particular seed germination speed, are major contributors to the variability of this trait. Metabolic profiling of these accessions has allowed us to describe a common pattern of metabolic change and to identify the levels of malate and aspartate metabolites as putative metabolic markers to estimate germination performance. Additionally, analysis of seed content of different hormones suggests that hormonal balance between ABA, GA and IAA at crucial time points during this process might underlie seed germination differences in these accessions. In this study, we have also defined the major transcriptome changes accompanying the germination process in B. napus. Furthermore, we have observed that earlier activation of key germination regulatory genes seems to generate the differences in germination speed observed between accessions in B. napus. Finally, we have found that protein-protein interactions between some of these key regulators are conserved in B. napus suggesting a shared regulatory network with other plants species. Altogether, our results provide a comprehensive and detailed picture of seed germination dynamics in oilseed rape. This new framework will be extremely valuable, not only to evaluate germination performance of B. napus accessions, but also to identify key targets for crop improvement in this important process.

Dataset Information

Leaf status and environmental signals jointly regulate proline metabolism in winter oilseed rape.

Publications

Leaf status and environmental signals jointly regulate proline metabolism in winter oilseed rape.

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