Unknown

Dataset Information

0

Introductions and early spread of SARS-CoV-2 in the New York City area.


ABSTRACT: New York City (NYC) has emerged as one of the epicenters of the current SARS-CoV-2 pandemic. To identify the early transmission events underlying the rapid spread of the virus in the NYC metropolitan area, we sequenced the virus causing COVID-19 in patients seeking care at the Mount Sinai Health System. Phylogenetic analysis of 84 distinct SARS-CoV2 genomes indicates multiple, independent but isolated introductions mainly from Europe and other parts of the United States. Moreover, we find evidence for community transmission of SARS-CoV-2 as suggested by clusters of related viruses found in patients living in different neighborhoods of the city.

SUBMITTER: Gonzalez-Reiche AS 

PROVIDER: S-EPMC7259823 | biostudies-literature | 2020 May

REPOSITORIES: biostudies-literature

altmetric image

Publications

Introductions and early spread of SARS-CoV-2 in the New York City area.

Gonzalez-Reiche Ana S AS   Hernandez Matthew M MM   Sullivan Mitchell J MJ   Ciferri Brianne B   Alshammary Hala H   Obla Ajay A   Fabre Shelcie S   Kleiner Giulio G   Polanco Jose J   Khan Zenab Z   Alburquerque Bremy B   van de Guchte Adriana A   Dutta Jayeeta J   Francoeur Nancy N   Melo Betsaida Salom BS   Oussenko Irina I   Deikus Gintaras G   Soto Juan J   Sridhar Shwetha Hara SH   Wang Ying-Chih YC   Twyman Kathryn K   Kasarskis Andrew A   Altman Deena R DR   Smith Melissa M   Sebra Robert R   Aberg Judith J   Krammer Florian F   García-Sastre Adolfo A   Luksza Marta M   Patel Gopi G   Paniz-Mondolfi Alberto A   Gitman Melissa M   Sordillo Emilia Mia EM   Simon Viviana V   van Bakel Harm H  

Science (New York, N.Y.) 20200529 6501


New York City (NYC) has emerged as one of the epicenters of the current severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. To identify the early transmission events underlying the rapid spread of the virus in the NYC metropolitan area, we sequenced the virus that causes coronavirus disease 2019 (COVID-19) in patients seeking care at the Mount Sinai Health System. Phylogenetic analysis of 84 distinct SARS-CoV-2 genomes indicates multiple, independent, but isolated introduction  ...[more]

Similar Datasets

| S-EPMC7276014 | biostudies-literature
| S-EPMC7706732 | biostudies-literature
| S-EPMC9088473 | biostudies-literature
| S-EPMC7411936 | biostudies-literature
| S-EPMC8733200 | biostudies-literature
| S-EPMC8426889 | biostudies-literature
| S-EPMC10127689 | biostudies-literature
| S-EPMC8242800 | biostudies-literature
2022-09-06 | GSE207923 | GEO