Dataset Information

Eggshell and environmental bacteria contribute to the intestinal microbiota of growing chickens.

ABSTRACT:

Background

The initial intestinal microbiota acquired from different sources has profound impacts on animal health and productivity. In modern poultry production practices, the source(s) of the establishing microbes and their overall contribution during development of gastrointestinal tract communities are still unclear. Using fertilized eggs from two independent sources, we assessed the impact of eggshell- and environmental-associated microbial communities on the successional processes and bacterial community structure throughout the intestinal tract of chickens for up to 6?weeks post-hatch.

Results

Culturing and sequencing techniques identified a viable, highly diverse population of anaerobic bacteria on the eggshell. The jejunal, ileal, and cecal microbial communities for the egg-only, environment-only, and conventionally raised birds generally displayed similar successional patterns characterized by increasing community richness and evenness over time, with strains of Enterococcus, Romboutsia, and unclassified Lachnospiraceae abundant for all three input groups in both trials. Bacterial community structures differed significantly based on trial and microbiota input with the exception of the egg-exposed and conventional birds in the jejunum at week 1 and the ileum at week 6. Cecal community structures were different based on trial and microbiota input source, and cecal short-chain fatty acid profiles at week 6 highlighted functional differences as well.

Conclusion

We identified distinct intestinal microbial communities and differing cecal short-chain fatty acid profiles between birds exposed to the microbiota associated with either the eggshell or environment, and those of conventionally hatched birds. Our data suggest the eggshell plays an appreciable role in the development of the chicken intestinal microbiota, especially in the jejunum and ileum where the community structure of the eggshell-only birds was similar to the structure of conventionally hatched birds. Our data identify a complex interplay between the eggshell and environmental microbiota during establishment and succession within the chicken gut. Further studies should explore the ability of eggshell- and environment-derived microbes to shape the dynamics of succession and how these communities can be targeted through interventions to promote gut health and mitigate food-borne pathogen colonization in poultry.

SUBMITTER: Maki JJ

PROVIDER: S-EPMC7288515 | biostudies-literature | 2020

REPOSITORIES: biostudies-literature

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Publications

Eggshell and environmental bacteria contribute to the intestinal microbiota of growing chickens.

Maki Joel J JJ Bobeck Elizabeth A EA Sylte Matthew J MJ Looft Torey T

Journal of animal science and biotechnology 20200611

<h4>Background</h4>The initial intestinal microbiota acquired from different sources has profound impacts on animal health and productivity. In modern poultry production practices, the source(s) of the establishing microbes and their overall contribution during development of gastrointestinal tract communities are still unclear. Using fertilized eggs from two independent sources, we assessed the impact of eggshell- and environmental-associated microbial communities on the successional processes ...[more]

PMID: 32537141

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Project description:Increasing environmental complexity, e.g., by providing environmental enrichment, has been suggested as a way to increase activity levels and improve leg health in broilers. The aim of this study was to investigate the effects of different types of environmental complexity on leg health and measures of welfare of fast-growing broilers housed according to conventional European legislation. A total of 58 pens with approximately 500 broilers each (Ross 308), corresponding to a stocking density of 40 kg/m2, were used. A total of 8 treatment groups, of which 5 were enrichment treatments (roughage, vertical panels, straw bales, and elevated platforms at 5 and 30 cm) and 3 were standard resources manipulations [increased distances between feed and water (7 m and 3.5 m), stocking density reduced to 34 kg/m2, and 1 control group (1.5 m distance between feed and water and no enrichment objects)] were randomly assigned to each pen. At 35 D of age, 60 birds from each pen were assessed for gait, footpad dermatitis, hock burns, plumage cleanliness, presence of scratches, and leg deformities. Birds housed with 30 cm elevated platforms had worse gait compared to those housed with straw bales and at the lower stocking density of 34 kg/m2 (P = 0.004 and P = 0.001). Broilers from the control group also had worse gait compared to those housed at 34 kg/m2 stocking density. In addition, birds housed with access to a 30 cm elevated platform had healthier footpads compared to birds housed with access to straw bales (P = 0.0001) and with increased distance between feed and water (P = 0.011). Furthermore, birds housed with straw bales had worse footpad condition compared to birds with access to a 5 cm elevated platform (P = 0.002). There were no observed treatment effects on scratches, plumage cleanliness, leg deformities and body weight (P > 0.05). Based on the welfare indicators used in the present study, decreased stocking density has the potential of improving animal welfare, whereas the effects of elevated platforms need to be further studied before a final conclusion can be drawn, as footpad health was positively affected, but walking ability was impaired.

Project description:BackgroundIntestinal microbiota plays a key role in nutrient digestion and utilization with a profound impact on feed efficiency of livestock animals. However, the intestinal microbes that are critically involved in feed efficiency remain elusive.MethodsTo identify intestinal bacteria associated with residual feed intake (RFI) in chickens, male Cobb broiler chicks were individually housed from day 14 to day 35. Individual RFI values were calculated for 56 chickens. Luminal contents were collected from the ileum, cecum, and cloaca of each animal on day 35. Bacterial DNA was isolated and subjected to 16S rRNA gene sequencing. Intestinal microbiota was classified to the feature level using Deblur and QIIME 2. High and low RFI groups were formed by selecting 15 and 17 chickens with the most extreme RFI values for subsequent LEfSe comparison of the difference in the microbiota. Spearman correlation analysis was further performed to identify correlations between the intestinal microbiota composition and RFI.ResultsNo significant difference in evenness, richness, and overall diversity of the microbiota in the ileum, cecum, or cloaca was observed between high and low RFI chickens. However, LEfSe analysis revealed a number of bacterial features being differentially enriched in either high or low RFI chickens. Spearman correlation analysis further identified many differentially enriched bacterial features to be significantly correlated with RFI (P < 0.05). Importantly, not all short-chain fatty acid (SCFA) producers showed a positive association with RFI. While two novel members of Oscillibacter and Butyricicoccus were more abundant in low-RFI, high-efficiency chickens, several other SCFA producers such as Subdoligranulum variabile and two related Peptostreptococcaceae members were negatively associated with feed efficiency. Moreover, a few closely-related Lachnospiraceae family members showed a positive correlation with feed efficiency, while others of the same family displayed an opposite relationship.ConclusionsOur results highlight the complexity of the intestinal microbiota and a need to differentiate the bacteria to the species, subspecies, and even strain levels in order to reveal their true association with feed efficiency. Identification of RFI-associated bacteria provides important leads to manipulate the intestinal microbiota for improving production efficiency, profitability, and sustainability of poultry production.

Dataset Information

Eggshell and environmental bacteria contribute to the intestinal microbiota of growing chickens.

Background

Results

Conclusion

Publications

Eggshell and environmental bacteria contribute to the intestinal microbiota of growing chickens.

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