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Recurrent TTN metatranscript-only c.39974-11T>G splice variant associated with autosomal recessive arthrogryposis multiplex congenita and myopathy.


ABSTRACT: We present eight families with arthrogryposis multiplex congenita and myopathy bearing a TTN intron 213 extended splice-site variant (NM_001267550.1:c.39974-11T>G), inherited in trans with a second pathogenic TTN variant. Muscle-derived RNA studies of three individuals confirmed mis-splicing induced by the c.39974-11T>G variant; in-frame exon 214 skipping or use of a cryptic 3' splice-site effecting a frameshift. Confounding interpretation of pathogenicity is the absence of exons 213-217 within the described skeletal muscle TTN N2A isoform. However, RNA-sequencing from 365 adult human gastrocnemius samples revealed that 56% specimens predominantly include exons 213-217 in TTN transcripts (inclusion rate ?66%). Further, RNA-sequencing of five fetal muscle samples confirmed that 4/5 specimens predominantly include exons 213-217 (fifth sample inclusion rate 57%). Contractures improved significantly with age for four individuals, which may be linked to decreased expression of pathogenic fetal transcripts. Our study extends emerging evidence supporting a vital developmental role for TTN isoforms containing metatranscript-only exons.

SUBMITTER: Bryen SJ 

PROVIDER: S-EPMC7306402 | biostudies-literature | 2020 Feb

REPOSITORIES: biostudies-literature

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Recurrent TTN metatranscript-only c.39974-11T>G splice variant associated with autosomal recessive arthrogryposis multiplex congenita and myopathy.

Bryen Samantha J SJ   Ewans Lisa J LJ   Pinner Jason J   MacLennan Suzanna C SC   Donkervoort Sandra S   Castro Diana D   Töpf Ana A   O'Grady Gina G   Cummings Beryl B   Chao Katherine R KR   Weisburd Ben B   Francioli Laurent L   Faiz Fathimath F   Bournazos Adam M AM   Hu Ying Y   Grosmann Carla C   Malicki Denise M DM   Doyle Helen H   Witting Nanna N   Vissing John J   Claeys Kristl G KG   Urankar Kathryn K   Beleza-Meireles Ana A   Baptista Julia J   Ellard Sian S   Savarese Marco M   Johari Mridul M   Vihola Anna A   Udd Bjarne B   Majumdar Anirban A   Straub Volker V   Bönnemann Carsten G CG   MacArthur Daniel G DG   Davis Mark R MR   Cooper Sandra T ST  

Human mutation 20191203 2


We present eight families with arthrogryposis multiplex congenita and myopathy bearing a TTN intron 213 extended splice-site variant (NM_001267550.1:c.39974-11T>G), inherited in trans with a second pathogenic TTN variant. Muscle-derived RNA studies of three individuals confirmed mis-splicing induced by the c.39974-11T>G variant; in-frame exon 214 skipping or use of a cryptic 3' splice-site effecting a frameshift. Confounding interpretation of pathogenicity is the absence of exons 213-217 within  ...[more]

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