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Identification of Adenosine-to-Inosine RNA Editing with Acrylonitrile Reagents.


ABSTRACT: New chemical probes have been designed to facilitate the identification of adenosine-to-inosine (A-to-I) edited RNAs. These reagents combine a conjugate acceptor for selective inosine covalent modification with functional groups for bioorthogonal biotinylation. The resulting biotinylated RNA was enriched and verified with RT-qPCR. This powerful chemical approach provides new opportunities to identify and quantify A-to-I editing sites.

SUBMITTER: Li Y 

PROVIDER: S-EPMC7308179 | biostudies-literature | 2019 Oct

REPOSITORIES: biostudies-literature

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Identification of Adenosine-to-Inosine RNA Editing with Acrylonitrile Reagents.

Li Ying Y   Göhl Matthias M   Ke Ke K   Vanderwal Christopher D CD   Spitale Robert C RC  

Organic letters 20190913 19


New chemical probes have been designed to facilitate the identification of adenosine-to-inosine (A-to-I) edited RNAs. These reagents combine a conjugate acceptor for selective inosine covalent modification with functional groups for bioorthogonal biotinylation. The resulting biotinylated RNA was enriched and verified with RT-qPCR. This powerful chemical approach provides new opportunities to identify and quantify A-to-I editing sites. ...[more]

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