Dataset Information

Niche Conservatism for Ecological Preference in the Louisiana iris species complex.

ABSTRACT: Spatial and temporal environmental variation influences evolutionary processes such as divergence among populations and species. Here, we investigate the patterns of niche evolution for the Louisiana irises as well as understanding the phylogenetic relationship between these species. Using BEAST, a species phylogeny was generated for the Louisiana irises in order to test the hypothesis of whether niche conservatism has played an important role for this species complex. Species Distribution Models were constructed for present day distributions to determine the environmental factors, which contribute to species ranges. Tests of niche similarity were performed in order to evaluate if niche conservatism is apparent within this species complex. We demonstrate that the Louisiana iris species complex is a monophyletic clade with I. brevicaulis and I. fulva as being sister to each other. The differences observed among the iris species, in regard to associated environmental factors suggest an effect from these components on the distributions and habitats occupied. Furthermore, tests of niche similarity indicate niche conservatism for all species comparisons. Working at the species level and assessing various factors that can influence differentiation, this study assessed a more complete picture of the ecological and evolutionary history of this species complex across their geographic and ecological range.

SUBMITTER: Hamlin JAP

PROVIDER: S-EPMC7394495 | biostudies-literature | 2017 Jan

REPOSITORIES: biostudies-literature

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Niche Conservatism for Ecological Preference in the Louisiana iris species complex.

Hamlin Jennafer A P JAP Simmonds Tyler J TJ Arnold Michael L ML

Biological journal of the Linnean Society. 20160919 1

Spatial and temporal environmental variation influences evolutionary processes such as divergence among populations and species. Here, we investigate the patterns of niche evolution for the Louisiana irises as well as understanding the phylogenetic relationship between these species. Using BEAST, a species phylogeny was generated for the Louisiana irises in order to test the hypothesis of whether niche conservatism has played an important role for this species complex. Species Distribution Model ...[more]

PMID: 32742021

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Project description:Background and aimsClimate is an important parameter in delimiting coarse-grained aspects of fundamental ecological niches of species; evolution of these niches has been considered a key component in biological diversification. We assessed phylogenetic niche conservatism and evolution in 24 species of the family Oleaceae in relation to temperature and precipitation variables. We studied niches of 17 Olea species and 7 species from other genera of Oleaceae globally.MethodsWe used nuclear ribosomal and plastid DNA to reconstruct an evolutionary tree for the family. We used an approach designed specifically to incorporate uncertainty and incomplete knowledge of species' ecological niche limits. We performed parsimony- and likelihood-based reconstructions of ancestral states on two independent phylogenetic hypotheses for the family. After detailed analysis, species' niches were classified into warm and cold niches, wet and dry niches, and broad and narrow niches.Key resultsGiven that full estimates of fundamental niches are difficult, we explore the alternative approach of explicit incorporation of knowledge of gaps in the information available, which allows avoidance of overestimation of amounts of evolutionary change. The result is a first synthetic view of evolutionary dynamics of ecological niches and distributional potential in a widespread plant family. Temperate regions of the Earth were occupied only by lineages that could derive with cold and dry niches; Southeast Asia held species with warm and wet niches; and parts of Africa held only species with dry niches.ConclusionsHigh temperature in Lutetian (Oligocene) and low temperature in Rupelian (Eocene) with major desertification events play important role for niche retraction and expansion in the history for Oleaceae clades. Associations between environmental niche characteristics and phylogeny reconstruction play an important role in understanding ecological niche conservatism, the overall picture was relatively slow or conservative niche evolution in this group.

Project description:1. The prevalence of phylogenetic niche conservatism (PNC) in nature is still a conflicting issue. Disagreement arises from confusion over its precise definition and the variety of approaches to measure its prevalence. Recent work highlighted that common measures of PNC strongly depend on the assumptions of the underlying model of niche evolution. However, this warning has not been well recognized in the applied literature and questionable approaches are still frequently applied. 2. The aim of this paper is to draw attention to the assumptions underlying commonly applied simple measures of PNC. We used a series of simulations to illustrate how misleading results can be if assumptions of niche evolution are violated, that the violation of assumptions is a common phenomenon and that testing assumptions requires in-depth pre-test. 3. We conclude that the seemingly simple measures of PNC, such as phylogenetic sign6al and evolutionary rate, are not so easy to apply if one accounts for the necessity to test model assumptions. In addition, these measures can be difficult to interpret. The common assumption that strong phylogenetic signal indicates PNC will be often invalid. In addition, the interpretation of some measures, e.g. the conclusion that evolutionary rate is slow enough to indicate PNC, requires a comparison with another clade, another trait or well-developed null model assumptions and thus additional data. 4. We suggest that studies investigating PNC should always compare alternative evolutionary models, and that model comparisons should in particular include flexible niche evolution models such as multiple-optima OU models, although these are computational intensive. These models are directly inherited from the concept of macro-evolutionary adaptive landscape, and can indicate PNC either by relative few peak shifts or by narrow peaks in the adaptive landscape. A test of PNC thus requires comparing these parameters of the macroevolutionary landscape between clades or time periods. 5. The general prevalence of PNC in nature should be evaluated only based on studies keeping up to the high standards of communicating the used definition of PNC, testing the assumptions made in the modelling approaches and including newly developed models in a model comparison approach.

Dataset Information

Niche Conservatism for Ecological Preference in the Louisiana iris species complex.

Publications

Niche Conservatism for Ecological Preference in the Louisiana iris species complex.

Similar Datasets

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