Ontology highlight
ABSTRACT:
SUBMITTER: Bernstein MN
PROVIDER: S-EPMC7445559 | biostudies-literature | 2020
REPOSITORIES: biostudies-literature
Bernstein Matthew N MN Gladstein Ariella A Latt Khun Zaw KZ Clough Emily E Busby Ben B Dillman Allissa A
F1000Research 20200519
The Sequence Read Archive (SRA) is a large public repository that stores raw next-generation sequencing data from thousands of diverse scientific investigations. Despite its promise, reuse and re-analysis of SRA data has been challenged by the heterogeneity and poor quality of the metadata that describe its biological samples. Recently, the MetaSRA project standardized these metadata by annotating each sample with terms from biomedical ontologies. In this work, we present a pair of Jupyter note ...[more]