Dataset Information

Fine-Tuning of Energy Levels Regulates SUC2 via a SNF1-Dependent Feedback Loop.

ABSTRACT: Nutrient sensing pathways are playing an important role in cellular response to different energy levels. In budding yeast, Saccharomyces cerevisiae, the sucrose non-fermenting protein kinase complex SNF1 is a master regulator of energy homeostasis. It is affected by multiple inputs, among which energy levels is the most prominent. Cells which are exposed to a switch in carbon source availability display a change in the gene expression machinery. It has been shown that the magnitude of the change varies from cell to cell. In a glucose rich environment Snf1/Mig1 pathway represses the expression of its downstream target, such as SUC2. However, upon glucose depletion SNF1 is activated which leads to an increase in SUC2 expression. Our single cell experiments indicate that upon starvation, gene expression pattern of SUC2 shows rapid increase followed by a decrease to initial state with high cell-to-cell variability. The mechanism behind this behavior is currently unknown. In this work we study the long-term behavior of the Snf1/Mig1 pathway upon glucose starvation with a microfluidics and non-linear mixed effect modeling approach. We show a negative feedback mechanism, involving Snf1 and Reg1, which reduces SUC2 expression after the initial strong activation. Snf1 kinase activity plays a key role in this feedback mechanism. Our systems biology approach proposes a negative feedback mechanism that works through the SNF1 complex and is controlled by energy levels. We further show that Reg1 likely is involved in the negative feedback mechanism.

SUBMITTER: Persson S

PROVIDER: S-EPMC7456839 | biostudies-literature | 2020

REPOSITORIES: biostudies-literature

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Fine-Tuning of Energy Levels Regulates <i>SUC2</i> via a SNF1-Dependent Feedback Loop.

Persson Sebastian S Welkenhuysen Niek N Shashkova Sviatlana S Cvijovic Marija M

Frontiers in physiology 20200814

Nutrient sensing pathways are playing an important role in cellular response to different energy levels. In budding yeast, <i>Saccharomyces cerevisiae</i>, the sucrose non-fermenting protein kinase complex SNF1 is a master regulator of energy homeostasis. It is affected by multiple inputs, among which energy levels is the most prominent. Cells which are exposed to a switch in carbon source availability display a change in the gene expression machinery. It has been shown that the magnitude of the ...[more]

PMID: 32922308

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Project description:RATIONALE:PGC1? (peroxisome proliferator-activated receptor gamma coactivator 1?) represents an attractive target interfering bioenergetics and mitochondrial homeostasis, yet multiple attempts have failed to upregulate PGC1? expression as a therapy, for instance, causing cardiomyopathy. OBJECTIVE:To determine whether a fine-tuning of PGC1? expression is essential for cardiac homeostasis in a context-dependent manner. METHODS AND RESULTS:Moderate cardiac-specific PGC1? overexpression through a ROSA26 locus knock-in strategy was utilized in WT (wild type) mice and in G3Terc-/- (third generation of telomerase deficient; hereafter as G3) mouse model, respectively. Ultrastructure, mitochondrial stress, echocardiographic, and a variety of biological approaches were applied to assess mitochondrial physiology and cardiac function. While WT mice showed a relatively consistent PGC1? expression from 3 to 12 months old, age-matched G3 mice exhibited declined PGC1? expression and compromised mitochondrial function. Cardiac-specific overexpression of PGC1? (PGC1?OE) promoted mitochondrial and cardiac function in 3-month-old WT mice but accelerated cardiac aging and significantly shortened life span in 12-month-old WT mice because of increased mitochondrial damage and reactive oxygen species insult. In contrast, cardiac-specific PGC1? knock in in G3 (G3 PGC1?OE) mice restored mitochondrial homeostasis and attenuated senescence-associated secretory phenotypes, thereby preserving cardiac performance with age and extending health span. Mechanistically, age-dependent defect in mitophagy is associated with accumulation of damaged mitochondria that leads to cardiac impairment and premature death in 12-month-old WT PGC1?OE mice. In the context of telomere dysfunction, PGC1? induction replenished energy supply through restoring the compromised mitochondrial biogenesis and thus is beneficial to old G3 heart. CONCLUSIONS:Fine-tuning the expression of PGC1? is crucial for the cardiac homeostasis because the balance between mitochondrial biogenesis and clearance is vital for regulating mitochondrial function and homeostasis. These results reinforce the importance of carefully evaluating the PGC1?-boosting strategies in a context-dependent manner to facilitate clinical translation of novel cardioprotective therapies.

Dataset Information

Fine-Tuning of Energy Levels Regulates SUC2 via a SNF1-Dependent Feedback Loop.

Publications

Fine-Tuning of Energy Levels Regulates <i>SUC2</i> via a SNF1-Dependent Feedback Loop.

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