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Bifurcation analysis of a SEIR epidemic system with governmental action and individual reaction

ABSTRACT: In this paper, the dynamical behavior of a SEIR epidemic system that takes into account governmental action and individual reaction is investigated. The transmission rate takes into account the impact of governmental action modeled as a step function while the decreasing contacts among individuals responding to the severity of the pandemic is modeled as a decreasing exponential function. We show that the proposed model is capable of predicting Hopf bifurcation points for a wide range of physically realistic parameters for the COVID-19 disease. In this regard, the model predicts periodic behavior that emanates from one Hopf point. The model also predicts stable oscillations connecting two Hopf points. The effect of the different model parameters on the existence of such periodic behavior is numerically investigated. Useful diagrams are constructed that delineate the range of periodic behavior predicted by the model.

SUBMITTER: Ajbar A

PROVIDER: S-EPMC7527295 | biostudies-literature | 2020 Jan

REPOSITORIES: biostudies-literature

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Project description:An epidemic disease caused by a new coronavirus has spread in Northern Italy with a strong contagion rate. We implement an SEIR model to compute the infected population and the number of casualties of this epidemic. The example may ideally regard the situation in the Italian Region of Lombardy, where the epidemic started on February 24, but by no means attempts to perform a rigorous case study in view of the lack of suitable data and the uncertainty of the different parameters, namely, the variation of the degree of home isolation and social distancing as a function of time, the initial number of exposed individuals and infected people, the incubation and infectious periods, and the fatality rate. First, we perform an analysis of the results of the model by varying the parameters and initial conditions (in order for the epidemic to start, there should be at least one exposed or one infectious human). Then, we consider the Lombardy case and calibrate the model with the number of dead individuals to date (May 5, 2020) and constrain the parameters on the basis of values reported in the literature. The peak occurs at day 37 (March 31) approximately, with a reproduction ratio R 0 of 3 initially, 1.36 at day 22, and 0.8 after day 35, indicating different degrees of lockdown. The predicted death toll is approximately 15,600 casualties, with 2.7 million infected individuals at the end of the epidemic. The incubation period providing a better fit to the dead individuals is 4.25 days, and the infectious period is 4 days, with a fatality rate of 0.00144/day [values based on the reported (official) number of casualties]. The infection fatality rate (IFR) is 0.57%, and it is 2.37% if twice the reported number of casualties is assumed. However, these rates depend on the initial number of exposed individuals. If approximately nine times more individuals are exposed, there are three times more infected people at the end of the epidemic and IFR = 0.47%. If we relax these constraints and use a wider range of lower and upper bounds for the incubation and infectious periods, we observe that a higher incubation period (13 vs. 4.25 days) gives the same IFR (0.6 vs. 0.57%), but nine times more exposed individuals in the first case. Other choices of the set of parameters also provide a good fit to the data, but some of the results may not be realistic. Therefore, an accurate determination of the fatality rate and characteristics of the epidemic is subject to knowledge of the precise bounds of the parameters. Besides the specific example, the analysis proposed in this work shows how isolation measures, social distancing, and knowledge of the diffusion conditions help us to understand the dynamics of the epidemic. Hence, it is important to quantify the process to verify the effectiveness of the lockdown.

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Bifurcation analysis of a SEIR epidemic system with governmental action and individual reaction

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