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Enhancing site-specific DNA integration by a Cas9 nuclease fused with a DNA donor-binding domain.


ABSTRACT: The CRISPR/Cas system is widely used for genome editing. However, robust and targeted insertion of a DNA segment remains a challenge. Here, we present a fusion nuclease (Cas9-N57) to enhance site-specific DNA integration via a fused DNA binding domain of Sleeping Beauty transposase to tether the DNA segment to the Cas9/sgRNA complex. The insertion was unidirectional and specific, and DNA fragments up to 12 kb in length were successfully integrated. As a test of the system, Cas9-N57 mediated the insertion of a CD19-specific chimeric antigen receptor (CD19-CAR) cassette into the AAVS1 locus in human T cells, and induced intrahepatic cholangiocarcinoma in mice by simultaneously mediating the insertion of oncogenic KrasG12D into the Rosa26 locus and disrupting Trp53 and Pten. Moreover, the nuclease-N57 fusion proteins based on AsCpf1 (AsCas12a) and CjCas9 exhibited similar activity. These findings demonstrate that CRISPR-associated nuclease-N57 protein fusion is a powerful tool for targeted DNA insertion and holds great potential for gene therapy applications.

SUBMITTER: Ma S 

PROVIDER: S-EPMC7544211 | biostudies-literature | 2020 Oct

REPOSITORIES: biostudies-literature

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Enhancing site-specific DNA integration by a Cas9 nuclease fused with a DNA donor-binding domain.

Ma Shufeng S   Wang Xinlong X   Hu Yongfei Y   Lv Jie J   Liu Chengfang C   Liao Kaitong K   Guo Xiaohua X   Wang Dong D   Lin Ying Y   Rong Zhili Z  

Nucleic acids research 20201001 18


The CRISPR/Cas system is widely used for genome editing. However, robust and targeted insertion of a DNA segment remains a challenge. Here, we present a fusion nuclease (Cas9-N57) to enhance site-specific DNA integration via a fused DNA binding domain of Sleeping Beauty transposase to tether the DNA segment to the Cas9/sgRNA complex. The insertion was unidirectional and specific, and DNA fragments up to 12 kb in length were successfully integrated. As a test of the system, Cas9-N57 mediated the  ...[more]

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