OposSOM-Browser: an interactive tool to explore omics data landscapes in health science.
Ontology highlight
ABSTRACT: BACKGROUND:oposSOM is a comprehensive, machine learning based open-source data analysis software combining functionalities such as diversity analyses, biomarker selection, function mining, and visualization. RESULTS:These functionalities are now available as interactive web-browser application for a broader user audience interested in extracting detailed information from high-throughput omics data sets pre-processed by oposSOM. It enables interactive browsing of single-gene and gene set profiles, of molecular 'portrait landscapes', of associated phenotype diversity, and signalling pathway activation patterns. CONCLUSION:The oposSOM-Browser makes available interactive data browsing for five transcriptome data sets of cancer (melanomas, B-cell lymphomas, gliomas) and of peripheral blood (sepsis and healthy individuals) at www.izbi.uni-leipzig.de/opossom-browser .
SUBMITTER: Loeffler-Wirth H
PROVIDER: S-EPMC7574456 | biostudies-literature | 2020 Oct
REPOSITORIES: biostudies-literature
ACCESS DATA