Dataset Information

DNA methylation in canine brains is related to domestication and dog-breed formation.

ABSTRACT: Epigenetic factors such as DNA methylation act as mediators in the interaction between genome and environment. Variation in the epigenome can both affect phenotype and be inherited, and epigenetics has been suggested to be an important factor in the evolutionary process. During domestication, dogs have evolved an unprecedented between-breed variation in morphology and behavior in an evolutionary short period. In the present study, we explore DNA methylation differences in brain, the most relevant tissue with respect to behavior, between wolf and dog breeds. We optimized a combined method of genotype-by-sequencing (GBS) and methylated DNA immunoprecipitation (MeDIP) for its application in canines. Genomic DNA from the frontal cortex of 38 dogs of 8 breeds and three wolves was used. GBS and GBS-MeDIP libraries were prepared and sequenced on Illuma HiSeq2500 platform. The reduced sample represented 1.18 ± 0.4% of the total dog genome (2,4 billion BP), while the GBS-MeDIP covered 11,250,788 ± 4,042,106 unique base pairs. We find substantial DNA methylation differences between wolf and dog and between the dog breeds. The methylation profiles of the different groups imply that epigenetic factors may have been important in the speciation from dog to wolf, but also in the divergence of different dog breeds. Specifically, we highlight methylation differences in genes related to behavior and morphology. We hypothesize that these differences are involved in the phenotypic variation found among dogs, whereas future studies will have to find the specific mechanisms. Our results not only add an intriguing new dimension to dog breeding but are also useful to further understanding of epigenetic involvement.

SUBMITTER: Sundman AS

PROVIDER: S-EPMC7595415 | biostudies-literature | 2020

REPOSITORIES: biostudies-literature

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DNA methylation in canine brains is related to domestication and dog-breed formation.

Sundman Ann-Sofie AS Pértille Fábio F Lehmann Coutinho Luiz L Jazin Elena E Guerrero-Bosagna Carlos C Jensen Per P

PloS one 20201029 10

Epigenetic factors such as DNA methylation act as mediators in the interaction between genome and environment. Variation in the epigenome can both affect phenotype and be inherited, and epigenetics has been suggested to be an important factor in the evolutionary process. During domestication, dogs have evolved an unprecedented between-breed variation in morphology and behavior in an evolutionary short period. In the present study, we explore DNA methylation differences in brain, the most relevan ...[more]

PMID: 33119634

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Project description:The dog has been suggested as a possible model for personality development over the lifespan, however, we know little about how aging may shape their personality or the magnitude of age-related changes. Previously we established that aging influences multiple dog demographics, which could also affect how personality traits change across different age periods. A demographic questionnaire and the Dog Personality Questionnaire were completed for a cross-sectional sample of 1,207 adult dogs living in Hungary (Mage = 7.71, SD = 4.12), split into six different age groups. Results revealed three of the five factors showed significant age effects. Activity/Excitability decreased with age, and whilst Responsiveness to training also decreased, only dogs older than 12 years differed significantly from the other groups. Aggressiveness toward animals showed a quadratic trajectory peaking in dogs aged 6-10 years. The greatest magnitude of age-related change was detected between late senior and geriatric ages, likely caused by compensatory behavioral changes to biological aging and owner attitudes to aging. When the models were re-run including the other explanatory variables, age group was no longer significant for the Responsiveness to training trait. The amount of time spent interacting/playing with the owner partially mediated the relationship between age and this trait, implying that interventions to increase play and training motivation may alleviate the negative effects of aging on dogs' trainability. Fifteen out of 28 explanatory variables were significantly associated with at least one of the five factors [weight, breed (pure/mixed breed), sex, off-leash activity, diet, previous trauma, age of dog when arrived in the household, play, dog training activities, number of known commands and dog obedience tasks]. Similarly to humans, dogs that had previously experienced trauma scored higher in fearfulness and aggression. A higher level of basic obedience was linked to some desirable dog personality traits (lower Fearfulness and Aggression, and higher Activity/Excitability and Responsiveness to training). Regardless of the direction of this relationship, obedience is an important aspect contributing to dog personality questionnaires and the dog-owner relationship. This study is unique in that it considered a wide variety of demographic variables which are influenced by aging.

Dataset Information

DNA methylation in canine brains is related to domestication and dog-breed formation.

Publications

DNA methylation in canine brains is related to domestication and dog-breed formation.

Similar Datasets

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