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Developing a pathway-independent and full-autonomous global resource allocation strategy to dynamically switching phenotypic states.


ABSTRACT: A grand challenge of biological chemical production is the competition between synthetic circuits and host genes for limited cellular resources. Quorum sensing (QS)-based dynamic pathway regulations provide a pathway-independent way to rebalance metabolic flux over the course of the fermentation. Most cases, however, these pathway-independent strategies only have capacity for a single QS circuit functional in one cell. Furthermore, current dynamic regulations mainly provide localized control of metabolic flux. Here, with the aid of engineering synthetic orthogonal quorum-related circuits and global mRNA decay, we report a pathway-independent dynamic resource allocation strategy, which allows us to independently controlling two different phenotypic states to globally redistribute cellular resources toward synthetic circuits. The strategy which could pathway-independently and globally self-regulate two desired cell phenotypes including growth and production phenotypes could totally eliminate the need for human supervision of the entire fermentation.

SUBMITTER: Wu J 

PROVIDER: S-EPMC7606477 | biostudies-literature | 2020 Nov

REPOSITORIES: biostudies-literature

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Developing a pathway-independent and full-autonomous global resource allocation strategy to dynamically switching phenotypic states.

Wu Junjun J   Bao Meijiao M   Duan Xuguo X   Zhou Peng P   Chen Caiwen C   Gao Jiahua J   Cheng Shiyao S   Zhuang Qianqian Q   Zhao Zhijun Z  

Nature communications 20201102 1


A grand challenge of biological chemical production is the competition between synthetic circuits and host genes for limited cellular resources. Quorum sensing (QS)-based dynamic pathway regulations provide a pathway-independent way to rebalance metabolic flux over the course of the fermentation. Most cases, however, these pathway-independent strategies only have capacity for a single QS circuit functional in one cell. Furthermore, current dynamic regulations mainly provide localized control of  ...[more]

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