Ontology highlight
ABSTRACT:
SUBMITTER: Rubens U
PROVIDER: S-EPMC7660398 | biostudies-literature | 2020 Jun
REPOSITORIES: biostudies-literature
Rubens Ulysse U Mormont Romain R Paavolainen Lassi L Bäcker Volker V Pavie Benjamin B Scholz Leandro A LA Michiels Gino G Maška Martin M Ünay Devrim D Ball Graeme G Hoyoux Renaud R Vandaele Rémy R Golani Ofra O Stanciu Stefan G SG Sladoje Natasa N Paul-Gilloteaux Perrine P Marée Raphaël R Tosi Sébastien S
Patterns (New York, N.Y.) 20200603 3
Image analysis is key to extracting quantitative information from scientific microscopy images, but the methods involved are now often so refined that they can no longer be unambiguously described by written protocols. We introduce BIAFLOWS, an open-source web tool enabling to reproducibly deploy and benchmark bioimage analysis workflows coming from any software ecosystem. A curated instance of BIAFLOWS populated with 34 image analysis workflows and 15 microscopy image datasets recapitulating co ...[more]