Asymmetric Synthesis of Oxygenated Monoterpenoids of Importance for Bark Beetle Ecology.
Ontology highlight
ABSTRACT:
SUBMITTER: Ganji S
PROVIDER: S-EPMC7705961 | biostudies-literature | 2020 Nov
REPOSITORIES: biostudies-literature
Publications
Asymmetric Synthesis of Oxygenated Monoterpenoids of Importance for Bark Beetle Ecology.
Ganji Suresh S Svensson Fredric G FG Unelius C Rikard CR
Journal of natural products 20201110 11
Herein we report the asymmetric syntheses of a number of oxygenated terpenoids that are of importance in the chemical ecology of bark beetles. These are pinocamphones, isopinocamphones, pinocarvones, and 4-thujanols (= sabinene hydrates). The camphones were synthesized from isopinocampheol, the pinocarvones from β-pinene, and the thujanols from sabinene. The NMR spectroscopic data, specific rotations, and elution orders of their stereoisomers on a chiral GC-phase (β-cyclodextrin) are also report ...[more]
Similar Datasets
Project description:Insects detect odors using an array of odorant receptors (ORs), which may expand through gene duplication. How and which new functions may evolve among related ORs within a species remain poorly investigated. We addressed this question by functionally characterizing ORs from the Eurasian spruce bark beetle Ips typographus, in which physiological and behavioral responses to pheromones, volatiles from host and nonhost trees, and fungal symbionts are well described. In contrast, knowledge of OR function is restricted to two receptors detecting the pheromone compounds (S)-(-)-ipsenol (ItypOR46) and (R)-(-)-ipsdienol (ItypOR49). These receptors belong to an Ips-specific OR-lineage comprising seven ItypORs. To gain insight into the functional evolution of related ORs, we characterized the five remaining ORs in this clade using Xenopus oocytes. Two receptors responded primarily to the host tree monoterpenes (+)-3-carene (ItypOR25) and p-cymene (ItypOR27). Two receptors responded to oxygenated monoterpenoids produced in larger relative amounts by the beetle-associated fungi, with ItypOR23 specific for (+)-trans-(1R, 4S)-4-thujanol, and ItypOR29 responding to (+)-isopinocamphone and similar ketones. ItypOR28 responded to the pheromone E-myrcenol from the competitor Ips duplicatus. Overall, the OR responses match well with those of previously characterized olfactory sensory neuron classes except that neurons detecting E-myrcenol have not been identified. The characterized ORs are under strong purifying selection and demonstrate a shared functional property in that they all primarily respond to monoterpenoids. The variation in functional groups among OR ligands and their diverse ecological origins suggest that neofunctionalization has occurred early in the evolution of this OR-lineage following gene duplication.
| S-EPMC8557457 | biostudies-literature
Project description:Addressing current global challenges such as biodiversity loss, global change, and increasing demands for ecosystem services requires improved ecological prediction. Recent increases in data availability, process understanding, and computing power are fostering quantitative approaches in ecology. However, flexible methodological frameworks are needed to utilize these developments towards improved ecological prediction. Deep learning is a rapidly evolving branch of machine learning, yet has received only little attention in ecology to date. It refers to the training of deep neural networks (DNNs), i.e. artificial neural networks consisting of many layers and a large number of neurons. We here provide a reproducible example (including code and data) of designing, training, and applying DNNs for ecological prediction. Using bark beetle outbreaks in conifer-dominated forests as an example, we show that DNNs are well able to predict both short-term infestation risk at the local scale and long-term outbreak dynamics at the landscape level. We furthermore highlight that DNNs have better overall performance than more conventional approaches to predicting bark beetle outbreak dynamics. We conclude that DNNs have high potential to form the backbone of a comprehensive disturbance forecasting system. More broadly, we argue for an increased utilization of the predictive power of DNNs for a wide range of ecological problems.
| S-EPMC6827389 | biostudies-literature
Project description:The present project deals with bark beetle gut total proteome from callow and black bark beetle, Ips typographus. The study aims to identify life stage-specific expression of gut proteins in bark beetles and their functional relevance.
2023-11-08 | PXD035407 | Pride
Project description:Bark beetle outbreaks have intensified in many forests around the globe in recent years. Yet, the legacy of these disturbances for future forest development remains unclear. Bark beetle disturbances are expected to increase further because of climate change. Consequently, feedbacks within the disturbance regime are of growing interest, for example, whether bark beetle outbreaks are amplifying future bark beetle activity (through the initiation of an even-aged cohort of trees) or dampening it (through increased structural and compositional diversity).We studied bark beetle-vegetation-climate interactions in the Bavarian Forest National Park (Germany), an area characterised by unprecedented bark beetle activity in the recent past. We simulated the effect of future bark beetle outbreaks on forest structure and composition and analysed how disturbance-mediated forest dynamics influence future bark beetle activity under different scenarios of climate change. We used process-based simulation modelling in combination with machine learning to disentangle the long-term interactions between vegetation, climate and bark beetles at the landscape scale.Disturbances by the European spruce bark beetle were strongly amplified by climate change, increasing between 59% and 221% compared to reference climate. Bark beetle outbreaks reduced the dominance of Norway spruce (Picea abies (L.) Karst.) on the landscape, increasing compositional diversity. Disturbances decreased structural diversity within stands (α diversity) and increased structural diversity between stands (β diversity). Overall, disturbance-mediated changes in forest structure and composition dampened future disturbance activity (a reduction of up to -67%), but were not able to fully compensate for the amplifying effect of climate change. Synthesis. Our findings indicate that the recent disturbance episode at the Bavarian Forest National Park was caused by a convergence of highly susceptible forest structures with climatic conditions favourable for bark beetle outbreaks. While future climate is increasingly conducive to massive outbreaks, the emerging landscape structure is less and less likely to support them. This study improves our understanding of the long-term legacies of ongoing bark beetle disturbances in Central Europe. It indicates that increased diversity provides an important dampening feedback, and suggests that preventing disturbances or homogenizing post-disturbance forests could elevate the future susceptibility to large-scale bark beetle outbreaks.
| S-EPMC7894307 | biostudies-literature
Project description:The American red flat bark beetle, Cucujus clavipes, is a wide distributed saproxylic species divided into two subspecies: ssp. clavipes restricted to eastern regions of North America and ssp. puniceus occurring only in western regions of this continent. Unique morphological features, including body shape and body coloration, make this species easy to recognize even for amateurs. Surprisingly, except some studies focused on physiological adaptations of the species, the ecology of C. clavipes was almost unstudied. Based on over 500 records collected by citizen scientists and deposited in the iNaturalist data base, we studied phenological activity of adult beetles, habitat preferences and impact of future climate change for both subspecies separately. The results clearly show that spp. clavipes and ssp. puniceus can be characterized by differences in phenology and macrohabitat preferences, and their ranges do not overlap at any point. Spp. clavipes is found as more opportunistic taxon occurring in different forests as well as in urban and agricultural areas with tree vegetation always in elevations below 500 m, while elevational distribution of ssp. puniceus covers areas up to 2300 m, and the beetle was observed mainly in forested areas. Moreover, we expect that climate warming will have negative influence on both subspecies with the possible loss of proper niches at level even up to 47-70% of their actual ranges during next few decades. As the species is actually recognized as unthreatened and always co-occurs with many other species, we suggest, because of its expected future habitat loss, to pay more attention to conservationists for possible negative changes in saproxylic insects and/or forest fauna in North America. In addition, as our results clearly show that both subspecies of C. clavipes differ ecologically, which strongly supports earlier significant morphological and physiological differences noted between them, we suggest that their taxonomical status should be verified by molecular data, because very probably they represent separate species.
| S-EPMC8074780 | biostudies-literature
Project description:European Bark Beetle Ips typographus is a secondary pest that affects dead and weakened spruce trees (Picea genus). Under certain environmental conditions, it has massive outbreaks, resulting in the attacks of healthy trees, becoming a forest pest. It has been proposed that the bark beetle's microbiome plays a key role in the insect's ecology, providing nutrients, inhibiting pathogens, and degrading tree defense compounds, among other probable traits yet to be discovered. During a study of bacterial associates from I. typographus, we isolated three strains identified as Pseudomonas from different beetle life stages. A polyphasic taxonomical approach showed that they belong to a new species for which the name Pseudomonas typographi sp nov. is proposed. Genome sequences show their potential to hydrolyze wood compounds and synthesize several vitamins; screening for enzymes production was verified using PNP substrates. Assays in Petri dishes confirmed cellulose and xylan hydrolysis. Moreover, the genomes harbor genes encoding chitinases and gene clusters involved in the synthesis of secondary metabolites with antimicrobial potential. In vitro tests confirmed the capability of the three P. typographi strains to inhibit several Ips beetles' pathogenic fungi. Altogether, these results suggest that P. typographi aids I. typographi nutrition and resistance to fungal pathogens.
| S-EPMC7564387 | biostudies-literature
Project description:Bark beetle outbreaks and forest fires have imposed severe ecological damage and caused billions of dollars in lost resources in recent decades. The impact of such combined disturbances is projected to become more severe, especially as climate change takes its toll on forest ecosystems in the coming years. Here, we investigate the impact of multiple disturbances in a demographically heterogeneous tree population, using an age-structured difference equation model of bark beetle outbreaks and forest fires. We identify two dynamical regimes for beetle and fire dynamics. The model predicts that fire helps dampen beetle outbreaks not only by removing host trees but also by altering the demographic structure of forest stands. We show that a stand thinning protocol, which reduces the population size of the largest few juvenile classes by a small percentage, is able to significantly reduce beetle-induced tree mortality. Our research demonstrates one approach to capturing compound disturbances in a mathematical model.
| S-EPMC8683088 | biostudies-literature
Project description:Long distance dispersal to locate suitable breeding sites is recognized as a key trait influencing the population dynamics and distribution of bark beetles and other saprophytic insects. While dispersal behavior has been studied for a range of aggressive 'tree killing' bark beetles, few have considered the dispersal behaviour of non-aggressive saprophytic bark beetles that utilize kairomones (host volatiles). We present the results of a mark-recapture experiment that examined adult dispersal patterns of the saprophytic bark beetle Hylurgus ligniperda. Releases took place in summer and autumn 2014, in a clearcut pine forest in the central North Island, New Zealand. Both flight-experienced and flight-naïve adults were marked and released in the center of a circular trap grid that extended to 960 m with 170 or 200 panel traps baited with a kairomone blend of alpha-pinene and ethanol. Of the 18,464 released H. ligniperda, 9,209 (49.9%) of the beetles flew, and 96 (1.04%) of the beetles that flew were recaptured. Individuals were recaptured at all distances. The recapture of flight-experienced beetles declined with dispersal distance, and a diffusion model showed heterogeneous dispersal tendencies within the population. Our best model estimated that 46% of flight-experienced beetles disperse > 1 km, and 1.6% > 5 km. Conversely, no declining pattern was shown in the recapture of flight-naïve beetles, suggesting that emerging H. ligniperda may require a period of flight to initiate chemotropic orientation behavior and subsequent attraction to traps. We discuss the implications of these findings for the management of phytosanitary risks. For instance, combining landscape knowledge of source populations with dispersal processes facilitates estimation of pest pressure at economically sensitive areas such as harvest and timber storage sites. Quantitative dispersal estimates also inform pest risk assessments by predicting spread rates for H. ligniperda that has proven establishment capabilities in other countries.
| S-EPMC5390978 | biostudies-literature
Project description:Understanding disturbance interactions and their ecological consequences remains a major challenge for research on the response of forests to a changing climate. When, where, and how one disturbance may alter the severity, extent, or occurrence probability of a subsequent disturbance is encapsulated by the concept of linked disturbances. Here, we evaluated 1) how climate and forest habitat variables, including disturbance history, interact to drive 2000s spruce beetle (Dendroctonus rufipennis) infestation of Engelmann spruce (Picea engelmannii) across the Southern Rocky Mountains; and 2) how previous spruce beetle infestation affects subsequent infestation across the Flat Tops Wilderness in northwestern Colorado, which experienced a severe landscape-scale spruce beetle infestation in the 1940s. We hypothesized that drought and warm temperatures would promote infestation, whereas small diameter and non-host trees, which may reflect past disturbance by spruce beetles, would inhibit infestation. Across the Southern Rocky Mountains, we found that climate and forest structure interacted to drive the 2000s infestation. Within the Flat Tops study area we found that stands infested in the 1940s were composed of higher proportions of small diameter and non-host trees ca. 60 years later. In this area, the 2000s infestation was constrained by a paucity of large diameter host trees (> 23 cm at diameter breast height), not climate. This suggests that there has not been sufficient time for trees to grow large enough to become susceptible to infestation. Concordantly, we found no overlap between areas affected by the 1940s infestation and the current infestation. These results show a severe spruce beetle infestation, which results in the depletion of susceptible hosts, can create a landscape template reducing the potential for future infestations.
| S-EPMC4441381 | biostudies-literature
Project description:Bark contributes approximately 20% to the total above-ground biomass of trees, yet bark is not properly accounted for when estimating carbon sequestered by trees. Current allometric functions estimate tree volume from diameter measured over the bark, and derive bark density and carbon content from estimates for wood. As the bark density of hardwood species is 40%-50% lower than the wood density, but nearly equivalent in conifers, bark carbon is overestimated for most species. The latter is further exacerbated by variation in bark volume with bark surface morphology.Fissured bark volume is overestimated by diameter over bark measurements by up to 40%. The vacant space in fissures can be accounted for by a bark fissure index (BFI). We calculate bark carbon for Australian species from a non-destructive and effective BFI using bark thickness measured in the field.Bark volume, and in turn bark carbon, scaled inversely with tree size (diameter) so that bark volume comprised 42% of small trees (10 cm diameter at breast height, DBH) but 23% of large trees (50 cm DBH). Our BFI method using a bark thickness gauge (BGM) yielded similar results than using the less time-efficient contour gauge method (CM) to estimate BFI (bias BGM-CM -1.3%, non-significant at p = 0.72). Both BGM and CM had an error of <4% compared to digitized BFI from destructive sampled stem disks. An average of 15 bark gauge measurements per tree estimated bark thickness (and inconsequence BFI) for both fissured and unfissured bark with <20% error relative to the exact value.Using the bark gauge method, BFI can be rapidly measured from large numbers of trees needed for estimating bark carbon at the community level and modelling carbon uptake, storage and cycling in woody biomes.
| S-EPMC8048897 | biostudies-literature