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Complete chloroplast genome sequence and phylogenetic analysis of Erysimum cheiranthoides.

ABSTRACT: Erysimum cheiranthoides is commonly known as treacle-mustard or wormseed wallflower with value for reducing high temperature and inducing diuresis. Here, we characterized the complete chloroplast (cp) genome of E. cheiranthoides using genome skimming sequencing. The circular complete cp genome is 154,611?bp in length, containing a large single-copy (LSC) region of 83,809?bp, two copies of IR (26,475?bp each) regions, and a small single-copy (SSC) region of 17,852?bp. It comprises 113 unique genes, including 79 different protein-coding genes, 30 tRNA genes, and 4 rRNA genes with 19 duplicated genes in the IR regions. Phylogenetic analysis suggests that E. cheiranthoides is sister to Olimarabidopsis pumila with full support value in Brassicaceae.

SUBMITTER: Zhang Q

PROVIDER: S-EPMC7706721 | biostudies-literature | 2019 Sep

REPOSITORIES: biostudies-literature

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Complete chloroplast genome sequence and phylogenetic analysis of Erysimum cheiranthoides.

Zhang Qingde Q Du Yingxue Y Bai Shangyuan S Yuan Wangjun W

Mitochondrial DNA. Part B, Resources 20190906 2

Erysimum cheiranthoides is commonly known as treacle-mustard or wormseed wallflower with value for reducing high temperature and inducing diuresis. Here, we characterized the complete chloroplast (cp) genome of E. cheiranthoides using genome skimming sequencing. The circular complete cp genome is 154,611 bp in length, containing a large single-copy (LSC) region of 83,809 bp, two copies of IR (26,475 bp each) regions, and a small single-copy (SSC) region of 17,852 bp. It comprises 1 ...[more]

PMID: 33365792

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