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The complete chloroplast genome of Castanea crenata Sieb. & Zucc.

ABSTRACT: The complete chloroplast genome sequence of Castanea crenata was sequenced and assembled using PacBio Sequel data. The cpDNA was 160,787?bp in length, containing a pair of inverted repeats (IRs) of 25,654?bp each separated by a large and small single copy (LSC and SSC) regions of 90,645?bp and 18,836?bp, respectively. The cpDNA contained 102 genes, including 65 protein-coding genes, 8 ribosomal RNA genes and 37 transfer RNA genes. Phylogenetic analysis indicated that C. crenata was closest to C. pumila var. pumila, which is known as a typical variety of American chinquapin or dwarf chestnut.

SUBMITTER: Kang MJ

PROVIDER: S-EPMC7707651 | biostudies-literature | 2019 Nov

REPOSITORIES: biostudies-literature

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The complete chloroplast genome of Castanea crenata Sieb. & Zucc.

Kang Min-Jeong MJ Kim Tae-Dong TD Lee Sang-A SA Lee Hyo-Ryeon HR Kim Chulwoo C Lee Hyoshin H Park Eung-Jun EJ

Mitochondrial DNA. Part B, Resources 20191108 2

The complete chloroplast genome sequence of Castanea crenata was sequenced and assembled using PacBio Sequel data. The cpDNA was 160,787 bp in length, containing a pair of inverted repeats (IRs) of 25,654 bp each separated by a large and small single copy (LSC and SSC) regions of 90,645 bp and 18,836 bp, respectively. The cpDNA contained 102 genes, including 65 protein-coding genes, 8 ribosomal RNA genes and 37 transfer RNA genes. Phylogenetic analysis indicated that C. crenata was ...[more]

PMID: 33366224

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