Ontology highlight
ABSTRACT:
Results: The microbial community composition in pig feces was analyzed by next generation sequencing of 16S rRNA amplicons. The data were evaluated for ?- and ?-diversity changes and changes at the different Operational Taxonomic Unit (OTU) levels by Shannon-Wiener and inverse Simpson index calculation as well as by Principal Coordinates Analysis based on Bray-Curtis dissimilarity. Microbial ?-diversity was reduced after EPI induction and reverted to nearly healthy state after PERT. Analysis of microbial composition and ?-diversity showed distinctive clusters of the three study groups and a change towards a composition comparable to healthy animals upon PERT. The relative abundance of possible pathobionts like Escherichia/Shigella, Acinetobacter or Stenotrophomonas was reduced by PERT.
Conclusion: These data demonstrate that EPI-induced dysbiosis could be reverted by PERT to a nearly healthy state. Elevated ?-diversity and the reduction of bacterial overgrowth after PERT promises benefits for EPI patients. Non-invasive microbiome studies may be useful for EPI therapy monitoring and as marker for response to PERT.
SUBMITTER: Ritz S
PROVIDER: S-EPMC7713139 | biostudies-literature | 2020 Dec
REPOSITORIES: biostudies-literature
Ritz Sabrina S Hahn Daniela D Wami Haleluya T HT Tegelkamp Karin K Dobrindt Ulrich U Schnekenburger Juergen J
Microbial cell factories 20201203 1
<h4>Background</h4>Exocrine pancreatic insufficiency (EPI) is characterized by the loss of active pancreatic enzymes and a resulting severely reduced food digestion. EPI therapy requires orally applied pancreatic enzyme replacement. The gut microbiome is a known mediator of intestinal diseases and may influence the outcome of EPI and the effects of a pancreatic enzyme replacement therapy (PERT). Here, we analyzed the effects of EPI and PERT on the gut microbiome in the model of pancreatic duct l ...[more]