The first mitochondrial genome of the living-fossil sawfly Macroxyela ferruginea (Hymenoptera: Xyelidae, Macroxyelinae).
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ABSTRACT:
SUBMITTER: Zheng BY
PROVIDER: S-EPMC7720971 | biostudies-literature |
REPOSITORIES: biostudies-literature
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Project description:The following eleven Empria species are reported from Japan: Empria candidata (Fallén, 1808), Empria japonica Heidemaa & Prous, 2011, Empria liturata (Gmelin, 1790), Empria loktini Ermolenko, 1971, Empria plana (Jakowlew, 1891), Empria quadrimaculata Takeuchi, 1952, Empria rubicola Ermolenko, 1971, Empria tridens (Konow, 1896), Empria tridentis Lee & Ryu, 1996, Empria honshuana Prous & Heidemaa, sp. n., and Empria takeuchii Prous & Heidemaa, sp. n. The lectotypes of Poecilosoma pallipes Matsumura, 1912, Empria itelmena Malaise, 1931, Tenthredo candidata Fallén, 1808, and Tenthredo (Poecilostoma) hybrida Erichson, 1851 are designated. Empria itelmena Malaise, 1931, syn. n. is synonymized with Empria plana (Jakowlew, 1891). Poecilosoma pallipes Matsumura, 1912, previously assigned to Empria, is transferred to Monsoma, creating Monsoma pallipes (Matsumura, 1912), comb. n. Results of phylogenetic analyses using mitochondrial (COI) and nuclear (ITS1 and ITS2) sequences are also provided.
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Project description:We describe Pamphilioidea: Mirolydidae Wang, Rasnitsyn et Ren, fam. n., containing Mirolyda hirta Wang, Rasnitsyn et Ren, gen. et sp. n., from the late Middle Jurassic Jiulongshan Formation of Daohugou, Inner Mongolia, China. The new taxon is characterized by unique forewing venation with the presence of forewing SC, 1-RS almost as long as 1-M, M?+?Cu straight, 2r-rs strongly reclival, and antenna with homonomous flagellum, revealing new and important details in antennal evolutionary transformations. Thus, M. hirta with a combination of primitive and more derived characters highlights its transitional state in the Pamphilioidea and complex mosaic evolution within Pamphilioidea in the late Middle Jurassic. The body of this species is densely covered with thin and long setae, suggesting its possible habit of visiting gymnosperm reproductive organs for pollen feeding and/or pollination during the late Middle Jurassic, much earlier than the appearance of angiosperm flowers.
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Project description:Type specimens of seven nominal species of sawfly described by Edward Newman and one by Charles Healy were studied. This material is housed in the Oxford University Museum of Natural History, United Kingdom. The following new synonymies are proposed (valid names in parentheses): Hartigia Schiødte, 1839 (Phylloecus Newman, 1838), Cephus helleri Taschenberg, 1871 (Phylloecus faunus Newman, 1838) and Euura gallae Newman, 1837 (Euura mucronata (Hartig, 1837)). The type species of Euura Newman, 1837 and Euura subgenus Gemmura E. L. Smith, 1968 belong to the same taxonomic species, Euura mucronata (Hartig, 1837), so that these genus group names become new synonyms. Lectotypes are designated for Phyllotoma tormentillae Healy, 1868, Fenusa ianthe Newman, 1837, Fenusa parviceps Newman, 1837, Selandria pallida Newman, 1837 and Phylloecus faunus Newman, 1838. 26 new combinations are proposed for species formerly placed in Hartigia and here transferred to Phylloecus, and 4 original combinations are re-instated as valid.
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Project description:Microsatellites are widely used as powerful markers in population genetics because of their ability to access recent genetic variation and to resolve subtle population genetic structures. However, their development, especially for non-model organisms with no available genome-wide sequence data has been difficult and time-consuming. Here, a commercial high-throughput sequencing approach (HTS) was used for the very first identification of microsatellite motifs in the genome of Xyela concava and the design of primer pairs flanking those motifs. Sixteen of those primer pairs were selected and implemented successfully to answer questions on the phylogeography and population genetics of X. concava. The markers were characterized in three geographically distinct populations of X. concava and tested for cross-species amplification in two additional Xyela and one Pleroneura species (Xyelidae). All markers showed substantial polymorphism as well as revealing subtle genetic structures among the three genotyped populations. We also analyzed a fragment of the nuclear gene region of sodium/potassium-transporting ATPase subunit alpha (NaK) and a partial mitochondrial gene region coding for cytochrome oxidase subunit I (COI) to demonstrate different genetic resolutions and sex-biased patterns of these markers, and their potential for combined use in future studies on the phylogeography and population genetics of X. concava. Although a limited number of populations was analyzed, we nevertheless obtained new insights on the latter two topics. The microsatellites revealed a generally high gene flow between the populations, but also suggested a deep historical segregation into two genetic lineages. This deep genetic segregation was confirmed by NaK. While the high gene flow was unexpected, because of assumed restricted dispersal ability of X. concava and the discontinuous distribution of the host trees between the populations, the segregation of two lineages is comprehensible and could be explained by different refuge areas of the hosts during glacial times. The COI results showed a discordant strong genetic structure between all populations, which might be explained by the smaller effective population size of the mitochondrial genome. However, given the frequent evidence of a similar nature in recent studies on sawflies, we also consider and discuss mitochondrial introgression on population level as an alternative explanation.
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Project description:BACKGROUND:Nygmata are prominent glandular structures on the wings of insects. They have been documented in some extant insects, including several families of Neuroptera and Mecoptera, the majority of Trichoptera, and a few of the hymenopteran Symphyta. However, because nygmata are rarely preserved in compression fossils, their early development and evolution are still enigmatic. For example, the only documented nygmata in the Hymenoptera are on the forewings of the Triassic xyelids Asioxyela paurura and Madygenius primitives. RESULTS:This study describes and illustrates a new genus and species from the family Xyelydidae, Rectilyda sticta gen. et sp. nov., from the Early Cretaceous Yixian Formation of Duolun County, Inner Mongolia, China. This genus has 1-RS reclival and linearly aligned with 1-M, which is different from all other genera in the Xyelydidae. In addition, R. sticta gen. et sp. nov. has clearly preserved nygmata: four symmetrical nygmata on each forewing and two on each hind wing. CONCLUSION:Previous reports of nygmata on the forewings of Triassic xyelids and extant sawflies, together with this new fossil record of nygmata, provide rare insights into their developmental trends, as well as into the evolution of hymenopterans and insects in general.
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Project description:The coelacanth has long been regarded as a "living fossil," with extant specimens looking very similar to fossils dating back to the Cretaceous period. The hypothesis of a slowly or even not evolving genome has been proposed to account for this apparent morphological stasis. While this assumption seems to be sustained by different evolutionary analyses on protein-coding genes, recent studies on transposable elements have provided more conflicting results. Indeed, the coelacanth genome contains many transposable elements and has been shaped by several major bursts of transposition during evolution. In addition, comparison of orthologous genomic regions from the genomes of the 2 extant coelacanth species L. chalumnae and L. menadoensis revealed multiple species-specific insertions, indicating transposable element recent activity and contribution to post-speciation genome divergence. These observations, which do not support the genome stasis hypothesis, challenge either the impact of transposable elements on organismal evolution or the status of the coelacanth as a "living fossil." Closer inspection of fossil and molecular data indicate that, even if coelacanths might evolve more slowly than some other lineages due to demographic and/or ecological factors, this variation is still in the range of a "non-fossil" vertebrate species.
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