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Dissecting Oligomeric States with Photoactivated Localization Microscopy: A Numerical Model.


ABSTRACT: Although photoactivated localization microscopy offers the potential to interrogate protein interactions in the physiological environment of a cell, uncertainties in the detection efficiency of photoactivatable proteins lead to complications with data interpretation. Here, we present a numerical model that provides probabilities to detect neighboring molecules dependent on their oligomerization status, density, detection efficiency, and radius, and can be used to assess oligomeric states or detection efficiencies of two molecular species. © 2020 The Authors. Cytometry Part A published by Wiley Periodicals, Inc. on behalf of International Society for Advancement of Cytometry.

SUBMITTER: Daniels B 

PROVIDER: S-EPMC7754424 | biostudies-literature | 2020 Nov

REPOSITORIES: biostudies-literature

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Dissecting Oligomeric States with Photoactivated Localization Microscopy: A Numerical Model.

Daniels Brian B   Wunder Christian C   Chen Vanessa V   Renz Malte M  

Cytometry. Part A : the journal of the International Society for Analytical Cytology 20200618 11


Although photoactivated localization microscopy offers the potential to interrogate protein interactions in the physiological environment of a cell, uncertainties in the detection efficiency of photoactivatable proteins lead to complications with data interpretation. Here, we present a numerical model that provides probabilities to detect neighboring molecules dependent on their oligomerization status, density, detection efficiency, and radius, and can be used to assess oligomeric states or dete  ...[more]

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