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Differential Centrifugation to Enrich Bacterial Ribonucleoprotein Bodies (BR bodies) from Caulobacter crescentus.


ABSTRACT: Bacterial RNP bodies (BR bodies) contain the mRNA decay machinery, but the collection of associated RNAs and proteins are poorly defined. Here, we present a protocol for the rapid differential centrifugation-based enrichment of BR bodies from Caulobacter crescentus cells. As native BR bodies are highly labile and dissociate by degrading internal mRNAs, an active site mutant of RNase E, which blocks dissolution of BR bodies, allows BR-body stabilization during enrichment. For complete details on the use and execution of this protocol, please refer to Al-Husini et al. (2020).

SUBMITTER: Muthunayake NS 

PROVIDER: S-EPMC7757671 | biostudies-literature | 2020 Dec

REPOSITORIES: biostudies-literature

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Differential Centrifugation to Enrich Bacterial Ribonucleoprotein Bodies (BR bodies) from <i>Caulobacter crescentus</i>.

Muthunayake Nisansala S NS   Al-Husini Nadra N   Schrader Jared M JM  

STAR protocols 20201209 3


Bacterial RNP bodies (BR bodies) contain the mRNA decay machinery, but the collection of associated RNAs and proteins are poorly defined. Here, we present a protocol for the rapid differential centrifugation-based enrichment of BR bodies from <i>Caulobacter crescentus</i> cells. As native BR bodies are highly labile and dissociate by degrading internal mRNAs, an active site mutant of RNase E, which blocks dissolution of BR bodies, allows BR-body stabilization during enrichment. For complete deta  ...[more]

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