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The complete chloroplast genome sequence of Magic Lily (Lycoris squamigera).

ABSTRACT: Magic Lily (Lycoris squamigera), belonging to the Amaryllidaceae family, is cultivated for ornamental and medicinal purposes. To characterize its genomic information, we obtained the complete chloroplast genome sequence of L. squamigera by assembling Illumina whole genome sequence data. The complete chloroplast genome is 158,482?bp in length which is composed of four unique regions, a large single copy region (LSC) of 86,454?bp, a small single copy region (SSC) of 18,500?bp, and a pair of inverted repeats (IR) of 26,764?bp. The genome annotation predicted 159 genes including 105 protein-coding genes, 46 tRNA genes, and 8 rRNA genes. Phylogenetic tree analysis revealed that L. squamigera clustered with Allium species belonging to the Amaryllidaceae family.

SUBMITTER: Jin SW

PROVIDER: S-EPMC7799502 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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The complete chloroplast genome sequence of Magic Lily (Lycoris squamigera).

Jin Seung Woo SW Park Jee Young JY Kang Shin-Jae SJ Park Hyun-Seung HS Shim Hyeonah H Lee Taek Joo TJ Kang Jung Hwa JH Sung Sang Hyun SH Yang Tae-Jin TJ

Mitochondrial DNA. Part B, Resources 20181026 2

Magic Lily (Lycoris squamigera), belonging to the Amaryllidaceae family, is cultivated for ornamental and medicinal purposes. To characterize its genomic information, we obtained the complete chloroplast genome sequence of L. squamigera by assembling Illumina whole genome sequence data. The complete chloroplast genome is 158,482 bp in length which is composed of four unique regions, a large single copy region (LSC) of 86,454 bp, a small single copy region (SSC) of 18,500 bp, and a ...[more]

PMID: 33474468

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