Dataset Information

Molecular evidence of two colour morphs of northern snakehead (Channa argus) based on mitochondrial 12S rRNA.

ABSTRACT: As an unclassified species, white-type Channa argus has existed for many years. In the present study, the relationships and genetic diversity in two colour morphs of northern snakehead were determined by the analysis of mitochondrial 12S rRNA gene, as well as other Channa species. The results of sequence analysis showed that the average genetic distance was 0.046 with the interspecies genetic distance ranging from 0.000 to 0.130; and the average interspecies genetic distance was estimated as 0.003 (range: 0.000-0.006). For the two colour morphs of Channa argus, the mean pair-wise genetic distance between them was also estimated as 0.003. Moreover, molecular phylogenetic tree was constructed using MEGA6.0, which showed that all the haploids gathered together as a branch and crossed each other. These results indicated that the white and biocolour-type Channa argus belonged to the same species, rather than subspecies at the molecular level, and the white-type Channa argus should be regard as an albino of biocolour type.

SUBMITTER: Zhou A

PROVIDER: S-EPMC7800386 | biostudies-literature | 2017 May

REPOSITORIES: biostudies-literature

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Molecular evidence of two colour morphs of northern snakehead (<i>Channa argus</i>) based on mitochondrial 12S rRNA.

Zhou Aiguo A Xie Shaolin S Wang Zhenlu Z Fan Lanfen L Wang Chao C Ye Qiao Q Chen Yanfeng Y Zou Jixing J

Mitochondrial DNA. Part B, Resources 20170516 1

As an unclassified species, white-type <i>Channa argus</i> has existed for many years. In the present study, the relationships and genetic diversity in two colour morphs of northern snakehead were determined by the analysis of mitochondrial 12S rRNA gene, as well as other Channa species. The results of sequence analysis showed that the average genetic distance was 0.046 with the interspecies genetic distance ranging from 0.000 to 0.130; and the average interspecies genetic distance was estimated ...[more]

PMID: 33490447

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Project description:Background:The introduction of northern snakehead (Channa argus; Anabantiformes: Channidae) and their subsequent expansion is one of many problematic biological invasions in the United States. This harmful aquatic invasive species has become established in various parts of the eastern United States, including the Potomac River basin, and has recently become established in the Mississippi River basin in Arkansas. Effective management of C. argus and prevention of its further spread depends upon knowledge of current population structure in the United States. Methods:Novel methods for invasive species using whole genomic scans provide unprecedented levels of data, which are able to investigate fine scale differences between and within populations of organisms. In this study, we utilize 2b-RAD genomic sequencing to recover 1,007 single-nucleotide polymorphism (SNP) loci from genomic DNA extracted from 165 C. argus individuals: 147 individuals sampled along the East Coast of the United States and 18 individuals sampled throughout Arkansas. Results:Analysis of those SNP loci help to resolve existing population structure and recover five genetically distinct populations of C. argus in the United States. Additionally, information from the SNP loci enable us to begin to calculate the long-term effective population size ranges of this harmful aquatic invasive species. We estimate long-term Ne to be 1,840,000-18,400,000 for the Upper Hudson River basin, 4,537,500-45,375,000 for the Lower Hudson River basin, 3,422,500-34,225,000 for the Potomac River basin, 2,715,000-7,150,000 for Philadelphia, and 2,580,000-25,800,000 for Arkansas populations. Discussion and Conclusions:This work provides evidence for the presence of more genetic populations than previously estimated and estimates population size, showing the invasive potential of C. argus in the United States. The valuable information gained from this study will allow effective management of the existing populations to avoid expansion and possibly enable future eradication efforts.

Dataset Information

Molecular evidence of two colour morphs of northern snakehead (Channa argus) based on mitochondrial 12S rRNA.

Publications

Molecular evidence of two colour morphs of northern snakehead (<i>Channa argus</i>) based on mitochondrial 12S rRNA.

Similar Datasets

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