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The chloroplast genome of an Endangered orchid species, Gastrochilus calceolaris (Orchidaceae: Aeridinae).

ABSTRACT: This study reported the complete chloroplast genome of a critically Endangered Orchidaceae species Gastrochilus calceolaris and its phylogenetic position in subtribe Aeridinae based on 12 orchid species plastomes. The plastome of G. calceolaris, with a 148,428?bp size, consisted of a pair of inverted repeat regions of 25,950?bp, a small single copy region of 11,139?bp, and a large single copy region of 85,389?bp. G?+?C content was 36.8%. The phylogenetic analysis highly supported the sisterhood between Gastrochilus and Pelatantheria and a monophyletic Gastrochilus group comprising of G. calceolaris, G. fuscopunctatus, and G. japonicus.

SUBMITTER: Tang F

PROVIDER: S-EPMC7800495 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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The chloroplast genome of an Endangered orchid species, Gastrochilus calceolaris (Orchidaceae: Aeridinae).

Tang Fengxia F Song Yu Y Liu Qiang Q

Mitochondrial DNA. Part B, Resources 20181003 2

This study reported the complete chloroplast genome of a critically Endangered Orchidaceae species Gastrochilus calceolaris and its phylogenetic position in subtribe Aeridinae based on 12 orchid species plastomes. The plastome of G. calceolaris, with a 148,428 bp size, consisted of a pair of inverted repeat regions of 25,950 bp, a small single copy region of 11,139 bp, and a large single copy region of 85,389 bp. G + C content was 36.8%. The phylogenetic analysis highly supported t ...[more]

PMID: 33474389

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