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The complete plastid genome sequence of garlic Allium sativum L.

ABSTRACT: The complete plastid genome sequence of garlic Allium sativum was determined using Illumina sequencing. The plastid DNA is 153,172?bp in length and includes a large single copy region (LSC) of 82,035?bp and a small single copy region (SSC) of 18,015?bp, which are separated by a pair of 26,561?bp inverted repeat regions (IRs). In total, 134 genes are identified, containing 82 protein-coding genes, 38 tRNA genes, eight rRNA genes and six pseudogenes. Most of genes occur as a single copy, while 19 genes are duplicated in IRs. Among 15 intron-containing genes, clpP and ycf3 contain two introns and the rest have one intron.

SUBMITTER: Filyushin MA

PROVIDER: S-EPMC7800674 | biostudies-literature | 2016 Nov

REPOSITORIES: biostudies-literature

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The complete plastid genome sequence of garlic Allium sativum L.

Filyushin Mikhail A MA Beletsky Alexey V AV Mazur Alexander M AM Kochieva Elena Z EZ

Mitochondrial DNA. Part B, Resources 20161112 1

The complete plastid genome sequence of garlic Allium sativum was determined using Illumina sequencing. The plastid DNA is 153,172 bp in length and includes a large single copy region (LSC) of 82,035 bp and a small single copy region (SSC) of 18,015 bp, which are separated by a pair of 26,561 bp inverted repeat regions (IRs). In total, 134 genes are identified, containing 82 protein-coding genes, 38 tRNA genes, eight rRNA genes and six pseudogenes. Most of genes occur as a single copy, wh ...[more]

PMID: 33473644

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