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Complete chloroplast genome of Ulleung Island endemic flowering cherry, Prunus takesimensis (Rosaceae), in Korea.

ABSTRACT: Prunus takesimensis is an endemic flowering cherry on Ulleung Island, Korea. The complete chloroplast (cp) genome of P. takesimensis was generated by de novo assembly using whole-genome next-generation sequencing approach. The cp genome size was 157,948?bp in length consisting of four regions; large single copy region (85,959?bp), small single copy region (19,117?bp), and a pair of inverted repeat regions (26,436?bp). The genome contained a total of 128 genes, including 83 coding genes, 8 rRNA genes, and 37 tRNA genes. Phylogenetic analysis for 20 reported genomes within the family Rosaceae showed the monophyly of the genus Prunus including newly sequenced P. takesimensis.

SUBMITTER: Cho MS 

PROVIDER: S-EPMC7800873 | biostudies-literature | 2018 Feb

REPOSITORIES: biostudies-literature

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Complete chloroplast genome of Ulleung Island endemic flowering cherry, <i>Prunus takesimensis</i> (Rosaceae), in Korea.

Cho Myong-Suk MS   Yang Ji Young JY   Kim Seung-Chul SC  

Mitochondrial DNA. Part B, Resources 20180224 1

<i>Prunus takesimensis</i> is an endemic flowering cherry on Ulleung Island, Korea. The complete chloroplast (cp) genome of <i>P. takesimensis</i> was generated by <i>de novo</i> assembly using whole-genome next-generation sequencing approach. The cp genome size was 157,948 bp in length consisting of four regions; large single copy region (85,959 bp), small single copy region (19,117 bp), and a pair of inverted repeat regions (26,436 bp). The genome contained a total of 128 genes, including 83 c  ...[more]

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