Dataset Information

An Odor Labeling Convolutional Encoder-Decoder for Odor Sensing in Machine Olfaction.

ABSTRACT: Deep learning methods have been widely applied to visual and acoustic technology. In this paper, we propose an odor labeling convolutional encoder-decoder (OLCE) for odor identification in machine olfaction. OLCE composes a convolutional neural network encoder and decoder where the encoder output is constrained to odor labels. An electronic nose was used for the data collection of gas responses followed by a normative experimental procedure. Several evaluation indexes were calculated to evaluate the algorithm effectiveness: accuracy 92.57%, precision 92.29%, recall rate 92.06%, F1-Score 91.96%, and Kappa coefficient 90.76%. We also compared the model with some algorithms used in machine olfaction. The comparison result demonstrated that OLCE had the best performance among these algorithms.

SUBMITTER: Wen T

PROVIDER: S-EPMC7826699 | biostudies-literature | 2021 Jan

REPOSITORIES: biostudies-literature

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An Odor Labeling Convolutional Encoder-Decoder for Odor Sensing in Machine Olfaction.

Wen Tengteng T Mo Zhuofeng Z Li Jingshan J Liu Qi Q Wu Liming L Luo Dehan D

Sensors (Basel, Switzerland) 20210108 2

Deep learning methods have been widely applied to visual and acoustic technology. In this paper, we propose an odor labeling convolutional encoder-decoder (OLCE) for odor identification in machine olfaction. OLCE composes a convolutional neural network encoder and decoder where the encoder output is constrained to odor labels. An electronic nose was used for the data collection of gas responses followed by a normative experimental procedure. Several evaluation indexes were calculated to evaluate ...[more]

PMID: 33429893

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Project description:BACKGROUND:Schizophrenia spectrum disorders (SSDs) are chronic conditions, but the severity of symptomatic experiences and functional impairments vacillate over the course of illness. Developing unobtrusive remote monitoring systems to detect early warning signs of impending symptomatic relapses would allow clinicians to intervene before the patient's condition worsens. OBJECTIVE:In this study, we aim to create the first models, exclusively using passive sensing data from a smartphone, to predict behavioral anomalies that could indicate early warning signs of a psychotic relapse. METHODS:Data used to train and test the models were collected during the CrossCheck study. Hourly features derived from smartphone passive sensing data were extracted from 60 patients with SSDs (42 nonrelapse and 18 relapse >1 time throughout the study) and used to train models and test performance. We trained 2 types of encoder-decoder neural network models and a clustering-based local outlier factor model to predict behavioral anomalies that occurred within the 30-day period before a participant's date of relapse (the near relapse period). Models were trained to recreate participant behavior on days of relative health (DRH, outside of the near relapse period), following which a threshold to the recreation error was applied to predict anomalies. The neural network model architecture and the percentage of relapse participant data used to train all models were varied. RESULTS:A total of 20,137 days of collected data were analyzed, with 726 days of data (0.037%) within any 30-day near relapse period. The best performing model used a fully connected neural network autoencoder architecture and achieved a median sensitivity of 0.25 (IQR 0.15-1.00) and specificity of 0.88 (IQR 0.14-0.96; a median 108% increase in behavioral anomalies near relapse). We conducted a post hoc analysis using the best performing model to identify behavioral features that had a medium-to-large effect (Cohen d>0.5) in distinguishing anomalies near relapse from DRH among 4 participants who relapsed multiple times throughout the study. Qualitative validation using clinical notes collected during the original CrossCheck study showed that the identified features from our analysis were presented to clinicians during relapse events. CONCLUSIONS:Our proposed method predicted a higher rate of anomalies in patients with SSDs within the 30-day near relapse period and can be used to uncover individual-level behaviors that change before relapse. This approach will enable technologists and clinicians to build unobtrusive digital mental health tools that can predict incipient relapse in SSDs.

Dataset Information

An Odor Labeling Convolutional Encoder-Decoder for Odor Sensing in Machine Olfaction.

Publications

An Odor Labeling Convolutional Encoder-Decoder for Odor Sensing in Machine Olfaction.

Similar Datasets

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