Dataset Information

Comparative models disentangle drivers of fruit production variability of an economically and ecologically important long-lived Amazonian tree.

ABSTRACT: Trees in the upper canopy contribute disproportionately to forest ecosystem productivity. The large, canopy-emergent Bertholletia excelsa also supports a multimillion-dollar commodity crop (Brazil nut), harvested almost exclusively from Amazonian forests. B. excelsa fruit production, however is extremely variable within populations and years, destabilizing local harvester livelihoods and the extractive economy. To understand this variability, data were collected in Acre, Brazil over 10 years at two sites with similar climate and forest types, but different fruit production levels, despite their proximity (~?30 km). One site consistently produced more fruit, showed less individual- and population-level variability, and had significantly higher soil P and K levels. The strongest predictor of fruit production was crown area. Elevation and sapwood area also significantly impacted fruit production, but effects differed by site. While number of wet days and dry season vapor pressure prior to flowering were significant production predictors, no climatic variables completely captured annual observed variation. Trees on the site with higher available P and K produced nearly three times more fruits, and appeared more resilient to prolonged drought and drier atmospheric conditions. Management activities, such as targeted fertilization, may shield income-dependent harvesters from expected climate changes and production swings, ultimately contributing to conservation of old growth forests where this species thrives.

SUBMITTER: Staudhammer CL

PROVIDER: S-EPMC7843625 | biostudies-literature | 2021 Jan

REPOSITORIES: biostudies-literature

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Comparative models disentangle drivers of fruit production variability of an economically and ecologically important long-lived Amazonian tree.

Staudhammer Christina L CL Wadt Lúcia Helena O LHO Kainer Karen A KA da Cunha Thiago Augusto TA

Scientific reports 20210128 1

Trees in the upper canopy contribute disproportionately to forest ecosystem productivity. The large, canopy-emergent Bertholletia excelsa also supports a multimillion-dollar commodity crop (Brazil nut), harvested almost exclusively from Amazonian forests. B. excelsa fruit production, however is extremely variable within populations and years, destabilizing local harvester livelihoods and the extractive economy. To understand this variability, data were collected in Acre, Brazil over 10 years at ...[more]

PMID: 33510254

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Project description:We analysed the flora of 46 forest inventory plots (25 m x 100 m) in old growth forests from the Amazonian region to identify the role of environmental (topographic) and spatial variables (obtained using PCNM, Principal Coordinates of Neighbourhood Matrix analysis) for common and rare species. For the analyses, we used multiple partial regression to partition the specific effects of the topographic and spatial variables on the univariate data (standardised richness, total abundance and total biomass) and partial RDA (Redundancy Analysis) to partition these effects on composition (multivariate data) based on incidence, abundance and biomass. The different attributes (richness, abundance, biomass and composition based on incidence, abundance and biomass) used to study this metacommunity responded differently to environmental and spatial processes. Considering standardised richness, total abundance (univariate) and composition based on biomass, the results for common species differed from those obtained for all species. On the other hand, for total biomass (univariate) and for compositions based on incidence and abundance, there was a correspondence between the data obtained for the total community and for common species. Our data also show that in general, environmental and/or spatial components are important to explain the variability in tree communities for total and common species. However, with the exception of the total abundance, the environmental and spatial variables measured were insufficient to explain the attributes of the communities of rare species. These results indicate that predicting the attributes of rare tree species communities based on environmental and spatial variables is a substantial challenge. As the spatial component was relevant for several community attributes, our results demonstrate the importance of using a metacommunities approach when attempting to understand the main ecological processes underlying the diversity of tropical forest communities.

Project description:BackgroundMassively parallel sequencing of cDNA is now an efficient route for generating enormous sequence collections that represent expressed genes. This approach provides a valuable starting point for characterizing functional genetic variation in non-model organisms, especially where whole genome sequencing efforts are currently cost and time prohibitive. The large and complex genomes of pines (Pinus spp.) have hindered the development of genomic resources, despite the ecological and economical importance of the group. While most genomic studies have focused on a single species (P. taeda), genomic level resources for other pines are insufficiently developed to facilitate ecological genomic research. Lodgepole pine (P. contorta) is an ecologically important foundation species of montane forest ecosystems and exhibits substantial adaptive variation across its range in western North America. Here we describe a sequencing study of expressed genes from P. contorta, including their assembly and annotation, and their potential for molecular marker development to support population and association genetic studies.ResultsWe obtained 586,732 sequencing reads from a 454 GS XLR70 Titanium pyrosequencer (mean length: 306 base pairs). A combination of reference-based and de novo assemblies yielded 63,657 contigs, with 239,793 reads remaining as singletons. Based on sequence similarity with known proteins, these sequences represent approximately 17,000 unique genes, many of which are well covered by contig sequences. This sequence collection also included a surprisingly large number of retrotransposon sequences, suggesting that they are highly transcriptionally active in the tissues we sampled. We located and characterized thousands of simple sequence repeats and single nucleotide polymorphisms as potential molecular markers in our assembled and annotated sequences. High quality PCR primers were designed for a substantial number of the SSR loci, and a large number of these were amplified successfully in initial screening.ConclusionsThis sequence collection represents a major genomic resource for P. contorta, and the large number of genetic markers characterized should contribute to future research in this and other pines. Our results illustrate the utility of next generation sequencing as a basis for marker development and population genomics in non-model species.

Project description:BackgroundMany ecologically important plants are pollinated or have their seeds dispersed by fruit bats, including the widely distributed African straw-colored fruit bats (Eidolon helvum). Their ability to fly long distances makes them essential for connecting plant populations across fragmented landscapes. While bats have been implicated as a reservoir of infectious diseases, their role in disease transmission to humans is not well understood. In this pilot study, we tracked E. helvum to shed light on their movement patterns in Tanzania and possible contact with other species.MethodsTracking devices were deployed on 25 bats captured in the Morogoro Municipal and Kilombero District area near the Udzungwa Mountains of Tanzania. Nightly flight patterns, areas corresponding to foraging bouts and feeding roosts, and new day roosts were determined from bat movement data and characterized according to their proximity to urban built-up and protected areas. Sites for additional environmental surveillance using camera traps were identified via tracking data to determine species coming in contact with fruits discarded by bats.ResultsTracking data revealed variability between individual bat movements and a fidelity to foraging areas. Bats were tracked from one to six nights, with a mean cumulative nightly flight distance of 26.14 km (min: 0.33, max: 97.57) based on data from high-resolution GPS tags. While the majority of their foraging locations were in or near urban areas, bats also foraged in protected areas, of which the Udzungwa Mountains National Park was the most frequented. Camera traps in fruit orchards frequented by tracked bats showed the presence of multiple species of wildlife, with vervet monkeys (Chlorocebus pygerythrus) observed as directly handling and eating fruit discarded by bats.ConclusionsBecause we observed multiple interactions of animals with fruits discarded by bats, specifically with vervet monkeys, the possibility of disease spillover risk exists via this indirect pathway. With flight distances of up to 97 km, however, the role of E. helvum in the seed dispersal of plants across both protected and urban built-up areas in Tanzania may be even more important, especially by helping connect increasingly fragmented landscapes during this Anthropocene epoch.

Dataset Information

Comparative models disentangle drivers of fruit production variability of an economically and ecologically important long-lived Amazonian tree.

Publications

Comparative models disentangle drivers of fruit production variability of an economically and ecologically important long-lived Amazonian tree.

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