Simple sequence repeats drive genome plasticity and promote adaptive evolution in penaeid shrimp.
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ABSTRACT:
SUBMITTER: Yuan J
PROVIDER: S-EPMC7878876 | biostudies-literature | 2021 Feb
REPOSITORIES: biostudies-literature
Publications
Simple sequence repeats drive genome plasticity and promote adaptive evolution in penaeid shrimp.
Yuan Jianbo J Zhang Xiaojun X Wang Min M Sun Yamin Y Liu Chengzhang C Li Shihao S Yu Yang Y Gao Yi Y Liu Fei F Zhang Xiaoxi X Kong Jie J Fan Guangyi G Zhang Chengsong C Feng Lu L Xiang Jianhai J Li Fuhua F
Communications biology 20210211 1
Simple sequence repeats (SSRs) are rare (approximately 1%) in most genomes and are generally considered to have no function. However, penaeid shrimp genomes have a high proportion of SSRs (>23%), raising the question of whether these SSRs play important functional and evolutionary roles in these SSR-rich species. Here, we show that SSRs drive genome plasticity and adaptive evolution in two penaeid shrimp species, Fenneropenaeus chinensis and Litopenaeus vannamei. Assembly and comparison of genom ...[more]
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