Expanded catalog of microbial genes and metagenome-assembled genomes from the pig gut microbiome.
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ABSTRACT:
SUBMITTER: Chen C
PROVIDER: S-EPMC7889623 | biostudies-literature | 2021 Feb
REPOSITORIES: biostudies-literature
Publications
Expanded catalog of microbial genes and metagenome-assembled genomes from the pig gut microbiome.
Chen Congying C Zhou Yunyan Y Fu Hao H Xiong Xinwei X Fang Shaoming S Jiang Hui H Wu Jinyuan J Yang Hui H Gao Jun J Huang Lusheng L
Nature communications 20210217 1
Gut microbiota plays an important role in pig health and production. Still, availability of sequenced genomes and functional information for most pig gut microbes remains limited. Here we perform a landscape survey of the swine gut microbiome, spanning extensive sample sources by deep metagenomic sequencing resulting in an expanded gene catalog named pig integrated gene catalog (PIGC), containing 17,237,052 complete genes clustered at 90% protein identity from 787 gut metagenomes, of which 28% a ...[more]
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