Browse
Submit Data
Databases
API
Help

Dataset Information

31 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The complete mitochondrial genome of the far Eastern myotis: Myotis bombinus Thomas, 1906 in mainland of Korea (Chiroptera, Vespertilionidae).

ABSTRACT: We have determined the second mitochondrial genome of Myotis bombinus Thomas, 1906 in mainland of Korea. The circular mitogenome of M. bombinus is 17,035 bp long which is slightly shorter than that of the previous mitogenome of M. bombinus. It includes 13 protein-coding genes (PCGs), two ribosomal RNA genes, and 22 transfer RNAs. The base composition was AT-biased (66.1%). Fifty single nucleotide polymorphisms and 14 insertions were identified between two mitogenomes of M. bombinus. Phylogenetic trees show that both M. bominus mitogenomes are clustered in one clade.

SUBMITTER: Kim B

PROVIDER: S-EPMC7894445 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

The complete mitochondrial genome of the Bechstein's bat, Myotis bechsteinii (Chiroptera, Vespertilionidae).

Project description:In this study, we present the complete mitochondrial genome of the Bechstein's bat, Myotis bechsteinii. The mitogenome is 17,151 bp in length and is AT-rich with base composition A (27.8%), C (22%), G (16.1%), and T (34.1%). The mitogenome shows conserved gene content and order similar with other mammalian mitogenomes, being composed of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and one control region. The majority of genes are encoded on the H-Strand except for ND6 and 8 tRNAs as found in other bat species. The field identification of Myotis bechsteinii was confirmed by phylogenetic analyses using datasets comprising whole mitogenomes and COXI. This mitogenome is a resource for future studies of Myotis bats and other mammals.

| S-EPMC7800535 | biostudies-literature

Range extension of Myotis midastactus (Chiroptera, Vespertilionidae) to Paraguay.

Project description:BackgroundMyotis midastactus Moratelli and Wilson, 2014 (Vespertilionidae, Myotinae) was described from the Myotis simus Thomas, 1901 complex based on collections from the Bolivian Savannah.New informationFour vouchers previously assigned to M. simus from the Alto Chaco in Paraguay (West of the Paraguay River) are reassigned here to M. midastactus. These specimens extend the geographic distribution of M. midastactus 1200 km southward, and constitute the first evidence of the species in the country. Based on other material from the Brazilian Pantanal and Cerrado, Central Paraguay and north-eastern Argentina, we also discuss the identity of simus-like populations south of the Amazon Basin. The status of these populations is still unclear, but the little evidence we have at hand indicates that these populations may represent another taxon-M. guaycuru Proença, 1943; whereas M. simus seems to be restricted to the Amazon basin. This hypothesis is still very speculative and requires further investigation. With the assignment of material from Alto Chaco to M. midastactus, seven species of Myotis are confirmed for Paraguay: M. albescens, M. lavali, M. levis, M. midastactus, M. nigricans, M. riparius, and M. ruber.

| S-EPMC4568408 | biostudies-literature

First record of Myotis albescens (Chiroptera, Vespertilionidae) in French Guiana.

Project description:BackgroundMyotis albescens occurs from Mexico southward to Uruguay and Argentina. The species is known for all South American countries except French Guiana and Chile.New informationBased on one specimen recently collected in French Guiana we fill part of the gap in the distribution of the species in South America. Myotis albescens occurs in the Guiana Shield with other four congeners, from which it can be distinguished by external and skull traits. As an aid to future identifications, we provide a key to this assemblage.

| S-EPMC4458588 | biostudies-literature

Complete mitochondrial genome of the East Asian fish-eating bat: Myotis ricketti (Chiroptera, Vespertilionidae).

Project description:I report the complete mitochondrial genome (mitogenome) of the East Asian fish-eating bat (Myotis ricketti or M. pilosus), also known as the Rickett's big footed bat. The total length of the circular M. ricketti mitogenome is 17,098 base pairs, containing 13 protein-coding genes (PCGs), two ribosomal RNAs, 22 transfer RNAs, and a non-coding control region (D-loop region). The gene order and organisation of this mitogenome are similar to most of other determined vertebrate mitogenomes, with the nucleotide base composition of A 34.22%, T 30.32%, C 22.80%, and G 12.66%. Besides, the mitogenomic D-loop region contains 29 copies of a tandem repeat sequence of six nucleotides (CATACG). The phylogenetic analysis indicates that M. ricketti is closely related to M. macrodactylus and M. petax. This study will contribute to the investigations of phylogeny and evolution for Myotis and its relevant taxa.

| S-EPMC7707413 | biostudies-literature

Catalogue of primary types of Neotropical Myotis (Chiroptera, Vespertilionidae).

Project description:Myotis comprises a diverse group of vespertilionid bats with worldwide distribution. Neotropical Myotis have an accentuated phenotypic conservatism, which makes species delimitation and identification difficult, hindering our understanding of the diversity, distribution, and phylogenetic relationships of taxa. To encourage new systematic reviews of the genus, a catalogue of the primary types and names is presented, current and in synonymy, for Neotropical Myotis. Currently 33 valid species (and three subspecies) are recognized, and their primary types are deposited in 12 scientific collections in the USA (30 types), Brazil (two types), England (two types), and France (one type). The names of 29 Neotropical Myotis species currently in synonymy were found. However, it is possible that some synonyms represent independent evolutionary lineages, considering recent results provided by taxonomic revisions.

| S-EPMC9848626 | biostudies-literature

DNA-barcoding and a new data about the karyotype of Myotis petax (Chiroptera, Vespertilionidae) in the Russian Far East.

Project description:The DNA-barcoding and chromosomal study of the eastern water bat, Myotis petax Hollister, 1912, from the earlier unexplored localities in the Russian Far East are carried out. The COI barcoding obtained for 18 from a total of 19 individuals captured in five localities in the Russian Far East showed the low nucleotide variability with the prevalence of the central, the most abundant haplotype. The chromosomal characteristics of eight M. petax specimens (2n = 44, NFa = 52) in the Russian Far East are clarified. The number and localization of NOR in karyotype of M. petax is described at the first time and differ from distributional patterns of NOR in the sibling species M. daubentonii Kuhl, 1819 that can be used as diagnostic feature. The considerable intraspecific variability in the distribution of heterochromatin material revealed is not typical of the genus Myotis, but it has been found in other species of the family Vespertilionidae.

| S-EPMC7661951 | biostudies-literature

Helminth communities of two populations of Myotis chiloensis (Chiroptera: Vespertilionidae) from Argentinean Patagonia.

Project description:Most of the studies on chiropteran endoparasites in Argentina come from the Central and Northeast regions of the country, and there is only one parasitological study of bats from the Argentinean Patagonia. The aim of this study is to describe the helminth fauna of 42 Myotis chiloensis, comparing the composition and the structure of the endoparasite communities between two populations, inhabiting different environments in Andean humid forest and the ecotone between forest and Patagonian steppe. A total of 697 helminths were recovered from 33 bats: five species of trematodes, Ochoterenatrema sp., Paralecithodendrium sp., Parabascus limatulus, Parabascus sp., and Postorchigenes cf. joannae, two species of cestodes, Vampirolepis sp. 1 and Vampirolepis sp. 2, and three species of nematodes, Allintoshius baudi, Physaloptera sp., and Physocephalus sp. All the helminths, but Physocephalus sp., were recovered from the small and large intestine. This is the first survey of M. chiloensis' helminth fauna. All the species, but A. baudi, represent new records of helminths in Patagonian bats. There were differences of parasite species richness between localities and both bat populations share almost half of the endoparasite species. Different preferences for intestinal regions were found for three species of trematodes in the bats from the site in the humid forest. Myotis chiloensis serves as both a definitive and intermediate host for endoparasites in the Patagonian ecosystem.

| S-EPMC5852992 | biostudies-literature

Genetic diversity of neotropical Myotis (chiroptera: vespertilionidae) with an emphasis on South American species.

Project description:BackgroundCryptic morphological variation in the Chiropteran genus Myotis limits the understanding of species boundaries and species richness within the genus. Several authors have suggested that it is likely there are unrecognized species-level lineages of Myotis in the Neotropics. This study provides an assessment of the diversity in New World Myotis by analyzing cytochrome-b gene variation from an expansive sample ranging throughout North, Central, and South America. We provide baseline genetic data for researchers investigating phylogeographic and phylogenetic patterns of Myotis in these regions, with an emphasis on South America.Methodology and principal findingsCytochrome-b sequences were generated and phylogenetically analyzed from 215 specimens, providing DNA sequence data for the most species of New World Myotis to date. Based on genetic data in our sample, and on comparisons with available DNA sequence data from GenBank, we estimate the number of species-level genetic lineages in South America alone to be at least 18, rather than the 15 species currently recognized.ConclusionsOur findings provide evidence that the perception of lower species richness in South American Myotis is largely due to a combination of cryptic morphological variation and insufficient sampling coverage in genetic-based systematic studies. A more accurate assessment of the level of diversity and species richness in New World Myotis is not only helpful for delimiting species boundaries, but also for understanding evolutionary processes within this globally distributed bat genus.

| S-EPMC3463536 | biostudies-literature

New records of Harpiolaisodon (Chiroptera, Vespertilionidae) from the Chinese mainland.

Project description:BackgroundThe new species, Harpiolaisodon Kuo et al., 2006, was described from Taiwan, China. So far, no distribution of this species outside Taiwan has been reported.New informationDuring two field investigations of small mammals in Guanyin Mountains Provincial Nature Reserve, Yuanyang, Yunnan, China, in April 2022 and May 2023, five individuals of Harpiola were collected in the mid-montane evergreen broad-leaved forest. Our morphological and molecular results reveal that these individuals from the Chinese mainland belong to Harpiolaisodon, extending the occurrence of this species well beyond its known distributions in Taiwan, China and Vietnam.

| S-EPMC10973766 | biostudies-literature

New data on David's myotis, Myotis davidii (Peters, 1869) (Mammalia, Chiroptera, Vespertilionidae), in Siberia and the Urals.

Project description:BackgroundDavid's myotis, Myotis davidii, is a vespertilionid bat inhabiting the wide spaces of the Palearctic region. Although previously registered in the north of Mongolia (50° N.L.) and the southern Urals (52° N.L.), data on the ecology of the species on the northern periphery of the range was missing.New informationThe northern border area of M. davidii in Siberia shifts by 350 km and the area increases by about 150,000 km2, in the Ural area by 150 km. Pups in the north of the range appear from the second half of June to July inclusive. Our data reveal that individuals from the Urals and the North Caucasus are genetically similar.

| S-EPMC6497625 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data