Dataset Information

Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China.

ABSTRACT: Ecological adaptation plays an important role in the process of plant expansion, and genetics and epigenetics are important in the process of plant adaptation. In this study, genetic and epigenetic analyses and soil properties were performed on D. angustifolia of 17 populations, which were selected in the tundra zone on the western slope of the Changbai Mountains. Our results showed that the levels of genetic and epigenetic diversity of D. angustifolia were relatively low, and the main variation occurred among different populations (amplified fragment length polymorphism (AFLP): 95%, methylation sensitive amplification polymorphism (MSAP): 87%). In addition, DNA methylation levels varied from 23.36% to 35.70%. Principal component analysis (PCA) results showed that soil properties of different populations were heterogeneous. Correlation analyses showed that soil moisture, pH and total nitrogen were significantly correlated with genetic diversity of D. angustifolia, and soil temperature and pH were closely related to epigenetic diversity. Simple Mantel tests and partial Mantel tests showed that genetic variation significantly correlated with habitat or geographical distance. However, the correlation between epigenetic variation and habitat or geographical distance was not significant. Our results showed that, in the case of low genetic variation and genetic diversity, epigenetic variation and DNA methylation may provide a basis for the adaptation of D. angustifolia.

SUBMITTER: Ni B

PROVIDER: S-EPMC7913720 | biostudies-literature | 2021 Feb

REPOSITORIES: biostudies-literature

ACCESS DATA

Publications

Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China.

Ni Biao B You Jian J Li Jiangnan J Du Yingda Y Zhao Wei W Chen Xia X

Plants (Basel, Switzerland) 20210203 2

Ecological adaptation plays an important role in the process of plant expansion, and genetics and epigenetics are important in the process of plant adaptation. In this study, genetic and epigenetic analyses and soil properties were performed on D. angustifolia of 17 populations, which were selected in the tundra zone on the western slope of the Changbai Mountains. Our results showed that the levels of genetic and epigenetic diversity of D. angustifolia were relatively low, and the ...[more]

PMID: 33546517

Similar Datasets

Project description:Deyeuxia purpurea, a low-altitude species, has been expanding upwards into alpine tundra, and this upward expansion is causing serious ecological consequences. However, few studies have been performed regarding its effects on soil faunal communities. We examine how the upward expansion of D. purpurea affects the abundance, richness, and diversity of soil mesofauna, and evaluate how different taxa of soil mesofauna respond to the upward expansion of D. purpurea in the alpine tundra of Changbai Mountains, northeast China. A total of 128 soil mesofaunal samples were collected from four treatments, namely high upward expansion (HU), medium upward expansion (MU), low upward expansion (LU), and native plant habitats (NP). The results revealed that the abundance of soil mesofauna was increased with the rise of D. purpurea upward expansion, and the taxonomic composition varied with the different levels of D. purpurea upward expansion in the alpine tundra of the Changbai Mountains. No unique taxa were collected in the native plant habitats, and the upward expansion of D. purpurea promoted the colonization of predatory invertebrates. Isotomidae and Gamasida responded positively to the herbaceous plant upward expansion, and thus they were considered to be a positive indicator of upward expansion. Hypogastruridae and Enchytraeidae responded relatively negatively, while Oribatida, Actinedida, and Pseudachorutidae had ambivalent responses to the upward expansion. Overall, the abundance of soil mesofauna can indicate the levels of the upward expansion of D. purpurea. Soil mesofaunal guild characteristics were altered by the upward expansion. The different taxa of soil mesofauna responded to herbaceous plants' upward expansion to various degrees. Therefore, this study provide evidence supporting the fact that the abundance of soil mesofauna can indicate the levels of upward expansion of D. purpurea, but the responses of soil mesofauna to the upward expansion of D. purpurea differ among their taxa.

Project description:Current theory holds that the intensity of biotic interactions decreases with increases in latitude and elevation; however, empirical data demonstrate great variation in the direction, strength, and shape of elevational changes in herbivory. The latitudinal position of mountains may be one important source of this variation, but the acute shortage of data from polar mountains hampers exploration of latitude effects on elevational changes in herbivory. Here, we reduce this knowledge gap by exploring six elevation gradients located in three Arctic mountain ranges to test the prediction that a decrease in herbivory occurs with increasing elevation from forest to alpine tundra. Across the 10 most abundant evergreen and deciduous woody plant species, relative losses of foliage to insect herbivores were 2.2-fold greater at the highest elevations (alpine tundra) than in mid-elevation birch woodlands or low-elevation coniferous forests. Plant quality for herbivores (quantified by specific leaf area) significantly decreased with elevation across all studied species, indicating that bottom-up factors were unlikely to shape the observed pattern in herbivory. An experiment with open-top chambers established at different elevations showed that even a slight increase in ambient temperature enhances herbivory in Arctic mountains. Therefore, we suggest that the discovered increase in herbivory with elevation is explained by higher temperatures at the soil surface in open habitats above the tree line compared with forests at lower elevations. This explanation is supported by the significant difference in elevational changes in herbivory between low and tall plants: herbivory on low shrubs increased fourfold from forest to alpine sites, while herbivory on trees and tall shrubs did not change with elevation. We suggest that an increase in herbivory with an increase in elevation is typical for high-latitude mountains, where inverse temperature gradients, especially at the soil surface, are common. Verification of this hypothesis requires further studies of elevational patterns in herbivory at high latitudes.

Dataset Information

Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China.

Publications

Genetic and Epigenetic Changes during the Upward Expansion of <i>Deyeuxia angustifolia</i> Kom. in the Alpine Tundra of the Changbai Mountains, China.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets