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Random and combinatorial mutagenesis for improved total production of secretory target protein in Escherichia coli.

ABSTRACT: Signal peptides and secretory carrier proteins are commonly used to secrete heterologous recombinant protein in Gram-negative bacteria. The Escherichia coli osmotically-inducible protein Y (OsmY) is a carrier protein that secretes a target protein extracellularly, and we have previously applied it in the Bacterial Extracellular Protein Secretion System (BENNY) to accelerate directed evolution. In this study, we reported the first application of random and combinatorial mutagenesis on a carrier protein to enhance total secretory target protein production. After one round of random mutagenesis followed by combining the mutations found, OsmY(M3) (L6P, V43A, S154R, V191E) was identified as the best carrier protein. OsmY(M3) produced 3.1?±?0.3 fold and 2.9?±?0.8 fold more secretory Tfu0937 ?-glucosidase than its wildtype counterpart in E. coli strains BL21(DE3) and C41(DE3), respectively. OsmY(M3) also produced more secretory Tfu0937 at different cultivation temperatures (37 °C, 30 °C and 25 °C) compared to the wildtype. Subcellular fractionation of the expressed protein confirmed the essential role of OsmY in protein secretion. Up to 80.8?±?12.2% of total soluble protein was secreted after 15 h of cultivation. When fused to a red fluorescent protein or a lipase from Bacillus subtillis, OsmY(M3) also produced more secretory protein compared to the wildtype. In this study, OsmY(M3) variant improved the extracellular production of three proteins originating from diverse organisms and with diverse properties, clearly demonstrating its wide-ranging applications. The use of random and combinatorial mutagenesis on the carrier protein demonstrated in this work can also be further extended to evolve other signal peptides or carrier proteins for secretory protein production in E. coli.

SUBMITTER: Gonzalez-Perez D

PROVIDER: S-EPMC7935960 | biostudies-literature | 2021 Mar

REPOSITORIES: biostudies-literature

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Random and combinatorial mutagenesis for improved total production of secretory target protein in Escherichia coli.

Gonzalez-Perez David D Ratcliffe James J Tan Shu Khan SK Wong Mary Chen May MCM Yee Yi Pei YP Nyabadza Natsai N Xu Jian-He JH Wong Tuck Seng TS Tee Kang Lan KL

Scientific reports 20210305 1

Signal peptides and secretory carrier proteins are commonly used to secrete heterologous recombinant protein in Gram-negative bacteria. The Escherichia coli osmotically-inducible protein Y (OsmY) is a carrier protein that secretes a target protein extracellularly, and we have previously applied it in the Bacterial Extracellular Protein Secretion System (BENNY) to accelerate directed evolution. In this study, we reported the first application of random and combinatorial mutagenesis on a carrier p ...[more]

PMID: 33674702

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Random and combinatorial mutagenesis for improved total production of secretory target protein in Escherichia coli.

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Random and combinatorial mutagenesis for improved total production of secretory target protein in Escherichia coli.

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